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diff --git a/.buildinfo b/.buildinfo
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diff --git a/.doctrees/Tutorials/CCP5-June-2021.doctree b/.doctrees/Tutorials/CCP5-June-2021.doctree
diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle
diff --git a/Tutorials/CCP5-June-2021.html b/Tutorials/CCP5-June-2021.html
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+  <title>Motivation &mdash; quippy 095307b documentation</title>
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@@ -133,13 +133,13 @@
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-  <center><p><img alt="2c70a9bd7203400c8a6683c5867d8c3d" src="../_images/warwick-logo.png" /></p>
+  <center><p><img alt="9962ebba55614d7b9a9f8dbbc3a4fac3" src="../_images/warwick-logo.png" /></p>
 <h1><p>Quantum Mechanics and Interatomic Potentials – the QUIP code</p>
 </h1><h3><p>James Kermode</p>
 </h3><p>Warwick Centre for Predictive Modelling / School of Engineering University of Warwick</p>
 <h4><p>CCP5++ Software Seminar - 17th June 2021</p>
-</h4><table bgcolor="#ffffff"><tr><td><p><img alt="fad39c97b2e04ab6af35f393062181e5" class="no-scaled-link" src="../_images/WCPM_logo_text.png" style="width: 100%;" /></p>
-</td><td><p><img alt="1bbc19248bbb444aaab45205c63647d9" class="no-scaled-link" src="../_images/hybrid.png" style="width: 100%;" /></p>
+</h4><table bgcolor="#ffffff"><tr><td><p><img alt="442a6331a7ee4798b0d70fe92a425c54" class="no-scaled-link" src="../_images/WCPM_logo_text.png" style="width: 100%;" /></p>
+</td><td><p><img alt="9ae8a2f39d174a24bcc02f5ab4289fb1" class="no-scaled-link" src="../_images/hybrid.png" style="width: 100%;" /></p>
 </td></tr></table></center><p><em>These slides will subsequently be made available at https://libatoms.github.io/QUIP/Tutorials</em></p>
 <div class="nbinput nblast docutils container">
 <div class="prompt highlight-none notranslate"><div class="highlight"><pre><span></span>[ ]:
@@ -190,7 +190,7 @@ <h1>Motivation<a class="headerlink" href="#Motivation" title="Permalink to this
 </ul>
 </li>
 </ul>
-<center><p><img alt="27c5a5163069419e94599456d652f62e" class="no-scaled-link" src="../_images/multiscale.png" style="width: 80%;" /></p>
+<center><p><img alt="f0ae3f6e32cf4e7496957870895e0281" class="no-scaled-link" src="../_images/multiscale.png" style="width: 80%;" /></p>
 </center><p><em>Image credit: Gábor Csányi</em></p>
 </section>
 <section id="The-QUIP-code">
@@ -408,7 +408,7 @@ <h1>Using QUIP with Python and the Atomic Simulation Environment<a class="header
 <li><p><a class="reference external" href="https://jupyter.org/">jupyter</a>/IPython notebooks encourage reproducible research</p></li>
 <li><p><a class="reference external" href="https://jupyter.org/">anaconda</a> distribution and package management system</p></li>
 </ul>
-<center><p><img alt="f87e8f4ed0114170be7b7ec27eb10a5f" class="no-scaled-link" src="../_images/scipy-stack.png" style="width: 70%;" /></p>
+<center><p><img alt="c6766dca3dfe4a549d8b00146f3ec5ca" class="no-scaled-link" src="../_images/scipy-stack.png" style="width: 70%;" /></p>
 </center><p><a class="reference external" href="http://www.scipy.org">http://www.scipy.org</a></p>
 </section>
 <section id="Atomic-Simulation-Environment-(ASE)">
@@ -418,7 +418,7 @@ <h1>Atomic Simulation Environment (ASE)<a class="headerlink" href="#Atomic-Simul
 <li><p>Wide range of calculators, very similar data model for Atoms objects to QUIP</p></li>
 <li><p>Can use many codes as drop-in replacements:</p></li>
 </ul>
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 </center><p><a class="reference external" href="https://wiki.fysik.dtu.dk/ase/">https://wiki.fysik.dtu.dk/ase/</a></p>
 </section>
 <section id="quippy-demo:-analysing-GAP-models-with-predictive-variance">

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diff --git a/Tutorials/adaptive-qmmm-solutions.html b/Tutorials/adaptive-qmmm-solutions.html
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diff --git a/Tutorials/adaptive-qmmm-step0.html b/Tutorials/adaptive-qmmm-step0.html
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diff --git a/Tutorials/adaptive-qmmm-step1.html b/Tutorials/adaptive-qmmm-step1.html
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-  <title>Step 1: Setup of the Silicon model system &mdash; quippy b8f6920 documentation</title>
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diff --git a/Tutorials/adaptive-qmmm-step2.html b/Tutorials/adaptive-qmmm-step2.html
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