You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
really sorry if it is a repeat, but I have a problem with installing QUIP on a cluster. this error keeps showing up then running make config. gfortran version is 11.2.0 installed with conda.
Unable to determine SIZEOF_FORTRAN_T
Check that your compiler is working and try again!
Build error:
make[1]: Entering directory `/home/users/ot/sctms11/QUIP/build/linux_x86_64_gfortran'
gfortran -x f95-cpp-input -ffree-line-length-none -ffree-form -fno-second-underscore -fPIC -fno-realloc-lhs -I/home/users/ot/sctms11/QUIP/src/libAtoms -I/home/users/ot/sctms11/QUIP/src/fox/objs.linux_x86_64_gfortran/finclude -O3 -DGETARG_F2003 -DGETENV_F2003 -DGFORTRAN -DFORTRAN_UNDERSCORE -D'GIT_VERSION="https://github.com/libAtoms/QUIP.git,v0.9.14"' -D'GAP_VERSION=1686220958' -D'QUIP_ARCH="linux_x86_64_gfortran"' -D'SIZEOF_FORTRAN_T=' -DHAVE_GAP -DHAVE_PRECON -DHAVE_QR -DHAVE_LOTF sizeof_fortran_t.f90 -o sizeof_fortran_t
f951: Warning: Nonexistent include directory '/home/users/ot/sctms11/QUIP/src/fox/objs.linux_x86_64_gfortran/finclude' [-Wmissing-include-dirs]
/home/users/ot/sctms11/miniconda3/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /home/users/ot/sctms11/miniconda3/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/lib/../lib64/libgcc_s.so.1: undefined reference to `memcpy@GLIBC_2.14'
collect2: error: ld returned 1 exit status
make[1]: *** [sizeof_fortran_t] Error 1
make[1]: Leaving directory `/home/users/ot/sctms11/QUIP/build/linux_x86_64_gfortran'
The text was updated successfully, but these errors were encountered:
It's a bit hard to debug these kinds of problems remotely. Find the source file "sizeof_fortran_t.f90" within the QUIP source tree, and try to compile it with your chosen compiler by hand. once that succeeds, we can identify the problem with the compile attempts of the make process.
really sorry if it is a repeat, but I have a problem with installing QUIP on a cluster. this error keeps showing up then running make config. gfortran version is 11.2.0 installed with conda.
The text was updated successfully, but these errors were encountered: