R code for the project pregnancy complications

The aim of this R code is to be transparent and document the data handling and statistical analyses performed for the project.

Language

English.

Data

The data consists of Swedish, Dutch and Irish individual patient data and therefore no data is stored in this repository.

Instructions

The project uses the R package projectTemplate, http://projecttemplate.net/ and is structured (and run) accordingly. Renv, https://rstudio.github.io/renv/articles/renv.html, is used for management of package dependencies.

Since the data is not available the code can not be run as is.

Workflow:

1. Run src/load_munge_cache.R or set loading and munging options in ProjectTemplate::reload.project() to TRUE in reports/Statistical_report_XX.Rmd

2. Knit reports/Statistical_report_XX.Rmd

Publication

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