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linquynus committed Jul 31, 2019
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Package: TFregulomeR
Type: Package
Title: Characterisation of transcription factor context-specific features and functions
Title: TFregulomeR reveals transcription factors’ context-specific features and functions
Version: 1.1.0
Description: An R-package linked to a large timely-updated compendium of cistrome and methylome datasets, implemented with functionalities that facilitate the manipulation and analysis of TFBS and methylome meta-data. In particular, TFregulomeR permits the characterisation of TF binding partners and cell-specific TFBSs, along with the study of TF’s functions in the context of different partners’ combinations and DNA methylation levels.
Authors@R: c(person("Quy Xiao Xuan", "Lin", email = "linquyzju@gmail.com", role = c("aut", "cre")),
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -77,7 +77,7 @@ TFregulomeR data compendium version: 1.1.0
A manuscript describing *TFregulomeR* has been submitted for peer review. If you currently use *TFregulomeR*, please cite us as follows:


Quy Xiao Xuan Lin, Denis Thieffry, Sudhakar Jha, Touati Benoukraf. _TFregulomeR: Flexible characterisation of transcription factor binding partners using cell-specific cistrome and methylome meta-data._ 2019. https://github.com/benoukraflab/TFregulomeR
Quy Xiao Xuan Lin, Denis Thieffry, Sudhakar Jha, Touati Benoukraf. _TFregulomeR reveals transcription factors’ context-specific features and functions_ 2019. https://github.com/benoukraflab/TFregulomeR

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4 changes: 2 additions & 2 deletions vignettes/TFregulomeR.Rmd
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---
title: "TFregulomeR: Characterisation of transcription factor context-specific features and functions"
title: "TFregulomeR reveals transcription factors’ context-specific features and functions"
author:
- name: Quy Xiao Xuan Lin
affiliation: National University of Singapore
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toc: true
fig_caption: yes
vignette: >
%\VignetteIndexEntry{TFregulomeR: Characterisation of transcription factor context-specific features and functions}
%\VignetteIndexEntry{TFregulomeR reveals transcription factors’ context-specific features and functions}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
---
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