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SPART.yaml
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SPART.yaml
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name: Spart
channels:
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/
- bioconda
- defaults
- etetoolkit
- conda-forge
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.0=anacondar_1
- _sysroot_linux-64_curr_repodata_hack=3=haa98f57_10
- abseil-cpp=20211102.0=hd4dd3e8_0
- aioeasywebdav=2.4.0=py39hf3d152e_1001
- aiohttp=3.8.3=py39h5eee18b_0
- aiosignal=1.2.0=pyhd3eb1b0_0
- amply=0.1.6=pyhd8ed1ab_0
- appdirs=1.4.4=pyhd3eb1b0_0
- async-timeout=4.0.2=py39h06a4308_0
- attmap=0.13.2=pyhd8ed1ab_0
- attrs=22.1.0=py39h06a4308_0
- augustus=3.5.0=pl5321h700735d_3
- bamtools=2.5.1=hd03093a_10
- bbmap=39.01=h92535d8_1
- bcftools=1.17=h3cc50cf_1
- bcrypt=3.2.0=py39h5eee18b_1
- bedtools=2.31.0=hf5e1c6e_2
- binutils_impl_linux-64=2.38=h2a08ee3_1
- biopython=1.78=py39h7f8727e_0
- blas=1.0=openblas
- blast=2.14.0=pl5321h6f7f691_2
- boost-cpp=1.78.0=h5adbc97_2
- boto3=1.24.28=py39h06a4308_0
- botocore=1.27.59=py39h06a4308_0
- bottleneck=1.3.5=py39h7deecbd_0
- bowtie2=2.5.1=py39h3321a2d_0
- brotlipy=0.7.0=py39h27cfd23_1003
- busco=5.4.6=pyhdfd78af_0
- bwa-mem2=2.2.1=hd03093a_5
- bwidget=1.9.11=1
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.19.0=h5eee18b_0
- ca-certificates=2023.05.30=h06a4308_0
- cachetools=4.2.2=pyhd3eb1b0_0
- cairo=1.16.0=hb05425b_5
- cdbtools=0.99=hdcf5f25_9
- certifi=2023.5.7=py39h06a4308_0
- cffi=1.15.1=py39h5eee18b_3
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- cigar=0.1.3=pyh864c0ab_1
- coin-or-cbc=2.10.7=hd28fd6d_0
- coin-or-cgl=0.60.5=h3cb4718_0
- coin-or-clp=1.17.7=h4e0f3ec_0
- coin-or-osi=0.108.7=h3cb4718_0
- coin-or-utils=2.11.6=h4e0f3ec_0
- coincbc=2.10.7=0_metapackage
- configargparse=1.4=pyhd3eb1b0_0
- connection_pool=0.0.3=pyhd3deb0d_0
- cryptography=39.0.1=py39h9ce1e76_0
- curl=7.26.0=1
- cutesv=2.0.3=pyhdfd78af_0
- datrie=0.8.2=py39h27cfd23_0
- dbus=1.10.20=0
- defusedxml=0.7.1=pyhd3eb1b0_0
- dendropy=4.6.1=pyhdfd78af_0
- diamond=2.1.8=h43eeafb_0
- docutils=0.18.1=py39h06a4308_3
- dpath=2.1.6=pyha770c72_0
- dropbox=11.36.1=py39h06a4308_0
- entrez-direct=16.2=he881be0_1
- epic2=0.0.52=py39h9f35bd6_6
- exceptiongroup=1.0.4=py39h06a4308_0
- expat=2.5.0=hcb278e6_1
- fastp=0.22.0=h2e03b76_0
- filechunkio=1.8=py_2
- filelock=3.9.0=py39h06a4308_0
- findutils=4.6.0=h166bdaf_1001
- flye=2.9.1=py39h6935b12_0
- font-ttf-dejavu-sans-mono=2.37=0
- font-ttf-inconsolata=2.000=0
- font-ttf-source-code-pro=2.030=0
- font-ttf-ubuntu=0.83=0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-anaconda=1=h8fa9717_0
- fonts-conda-ecosystem=1=hd3eb1b0_0
- freetype=2.12.1=h4a9f257_0
- fribidi=1.0.10=h7b6447c_0
- frozenlist=1.3.3=py39h5eee18b_0
- ftputil=5.0.4=pyhd8ed1ab_0
- gawk=5.1.0=h7b6447c_0
- gcc_impl_linux-64=11.2.0=h1234567_1
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=11.2.0=h7a446d4_16
- gitdb=4.0.7=pyhd3eb1b0_0
- gitpython=3.1.30=py39h06a4308_0
- glib=2.76.4=hfc55251_0
- glib-tools=2.76.4=hfc55251_0
- gmp=6.2.1=h295c915_3
- google-api-core=2.10.1=py39h06a4308_0
- google-api-python-client=2.93.0=pyhd8ed1ab_0
- google-auth=2.6.0=pyhd3eb1b0_0
- google-auth-httplib2=0.1.0=pyhd8ed1ab_1
- google-cloud-core=2.3.2=py39h06a4308_0
- google-cloud-storage=2.6.0=py39h06a4308_0
- google-crc32c=1.5.0=py39h5eee18b_0
- google-resumable-media=2.4.0=py39h06a4308_0
- googleapis-common-protos=1.56.4=py39h06a4308_0
- graphaligner=1.0.17=hd03093a_0
- graphite2=1.3.14=h295c915_1
- grpc-cpp=1.48.2=h5bf31a4_0
- grpcio=1.48.2=py39h5bf31a4_0
- gsl=2.7=he838d99_0
- gxx_impl_linux-64=11.2.0=h1234567_1
- harfbuzz=6.0.0=h8e241bc_0
- hifiasm=0.19.5=h43eeafb_2
- hmmer=3.1b2=3
- htslib=1.17=h6bc39ce_1
- httplib2=0.22.0=pyhd8ed1ab_0
- humanfriendly=10.0=py39h06a4308_1
- icu=70.1=h27087fc_0
- idna=3.4=py39h06a4308_0
- iniconfig=1.1.1=pyhd3eb1b0_0
- intervaltree=3.1.0=pyhd3eb1b0_0
- irissv=1.0.4=hdfd78af_2
- jasminesv=1.1.5=hdfd78af_0
- jinja2=3.1.2=py39h06a4308_0
- jmespath=0.10.0=pyhd3eb1b0_0
- jpeg=9e=h5eee18b_1
- jsonschema=4.17.3=py39h06a4308_0
- jupyter_core=5.3.0=py39h06a4308_0
- k8=0.2.5=hdcf5f25_4
- kernel-headers_linux-64=3.10.0=h57e8cba_10
- krb5=1.19.4=h568e23c_0
- ld_impl_linux-64=2.38=h1181459_1
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=17_linux64_openblas
- libcblas=3.9.0=17_linux64_openblas
- libcrc32c=1.1.2=h6a678d5_0
- libcurl=7.88.1=h91b91d3_0
- libdeflate=1.13=h166bdaf_0
- libdivsufsort=2.0.2=h031d066_8
- libedit=3.1.20221030=h5eee18b_0
- libev=4.33=h7f8727e_1
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.4=h6a678d5_0
- libgcc-devel_linux-64=11.2.0=h1234567_1
- libgcc-ng=13.1.0=he5830b7_0
- libgfortran-ng=13.1.0=h69a702a_0
- libgfortran5=13.1.0=h15d22d2_0
- libglib=2.76.4=hebfc3b9_0
- libgomp=13.1.0=he5830b7_0
- libiconv=1.17=h166bdaf_0
- libidn2=2.3.4=h5eee18b_0
- libjemalloc=5.3.0=hcb278e6_0
- liblapack=3.9.0=17_linux64_openblas
- libnghttp2=1.52.0=ha637b67_1
- libnsl=2.0.0=h5eee18b_0
- libopenblas=0.3.23=pthreads_h80387f5_0
- libpng=1.6.39=h5eee18b_0
- libprotobuf=3.20.3=he621ea3_0
- libsodium=1.0.18=h7b6447c_0
- libsqlite=3.42.0=h2797004_0
- libssh2=1.10.0=h37d81fd_2
- libstdcxx-devel_linux-64=11.2.0=h1234567_1
- libstdcxx-ng=13.1.0=hfd8a6a1_0
- libtiff=4.4.0=h0e0dad5_3
- libunistring=0.9.10=h27cfd23_0
- libuuid=2.38.1=h0b41bf4_0
- libwebp-base=1.2.4=h5eee18b_1
- libxcb=1.15=h7f8727e_0
- libxml2=2.10.3=hca2bb57_4
- libzlib=1.2.13=hd590300_5
- logmuse=0.2.6=pyh8c360ce_0
- lp_solve=5.5.2.5=h14c3975_1001
- lz4-c=1.9.4=h6a678d5_0
- make=4.2.1=h1bed415_1
- markdown-it-py=2.2.0=py39h06a4308_1
- markupsafe=2.1.1=py39h7f8727e_0
- mashmap=3.0.5=h97b747e_0
- mbg=1.0.15=hdcf5f25_2
- mdurl=0.1.0=py39h06a4308_0
- merqury=1.3=hdfd78af_1
- meryl=1.3=hdbdd923_2
- metaeuk=6.a5d39d9=pl5321h6a68c12_3
- metis=5.1.0=hf484d3e_4
- minimap2=2.24=h7132678_1
- mpfr=4.0.2=hb69a4c5_1
- mscorefonts=0.0.1=3
- multidict=6.0.2=py39h5eee18b_0
- mummer=3.23=pl5321hdbdd923_16
- mysql-connector-c=6.1.11=h24aacaa_2
- natsort=7.1.1=pyhd3eb1b0_0
- nbformat=5.7.0=py39h06a4308_0
- ncbi-vdb=3.0.0=pl5321h87f3376_0
- ncurses=6.4=h6a678d5_0
- networkx=2.8.4=py39h06a4308_1
- numexpr=2.8.4=py39hd2a5715_1
- numpy=1.25.0=py39heeff2f4_0
- numpy-base=1.25.0=py39h8a23956_0
- oauth2client=4.1.3=py_0
- openblas=0.3.23=pthreads_h855a84d_0
- openjdk=11.0.13=h87a67e3_0
- openssl=1.1.1u=h7f8727e_0
- packaging=23.0=py39h06a4308_0
- pandas=1.5.3=py39h417a72b_0
- pango=1.50.14=hd33c08f_0
- paramiko=2.8.1=pyhd3eb1b0_0
- parasail-python=1.3.4=py39h4e691d4_0
- pbzip2=1.1.13=0
- pcre=8.45=h295c915_0
- pcre2=10.40=hc3806b6_0
- peppy=0.35.6=pyhd8ed1ab_0
- perl=5.32.1=0_h5eee18b_perl5
- perl-apache-test=1.43=pl5321hdfd78af_0
- perl-app-cpanminus=1.7046=pl5321hd8ed1ab_0
- perl-archive-tar=2.40=pl5321hdfd78af_0
- perl-base=2.23=pl5321hdfd78af_2
- perl-carp=1.38=pl5321hdfd78af_4
- perl-class-load=0.25=pl5321hdfd78af_1
- perl-class-load-xs=0.10=pl5321h9f5acd7_6
- perl-class-method-modifiers=2.13=pl5321hdfd78af_0
- perl-common-sense=3.75=pl5321hdfd78af_0
- perl-compress-raw-bzip2=2.201=pl5321h87f3376_1
- perl-compress-raw-zlib=2.105=pl5321h87f3376_0
- perl-constant=1.33=pl5321hdfd78af_2
- perl-cpan-meta-check=0.014=pl5321hdfd78af_1
- perl-cpan-meta-requirements=2.143=pl5321hdfd78af_0
- perl-data-optlist=0.113=pl5321ha770c72_0
- perl-dbi=1.643=pl5321hec16e2b_1
- perl-devel-globaldestruction=0.14=pl5321hdfd78af_1
- perl-devel-overloadinfo=0.007=pl5321hdfd78af_0
- perl-devel-stacktrace=2.04=pl5321hdfd78af_1
- perl-dist-checkconflicts=0.11=pl5321hdfd78af_3
- perl-encode=3.19=pl5321hec16e2b_1
- perl-eval-closure=0.14=pl5321h9f5acd7_6
- perl-exporter=5.72=pl5321hdfd78af_2
- perl-exporter-tiny=1.002002=pl5321hdfd78af_0
- perl-extutils-makemaker=7.70=pl5321hd8ed1ab_0
- perl-file-path=2.18=pl5321hd8ed1ab_0
- perl-file-temp=0.2304=pl5321hd8ed1ab_0
- perl-file-which=1.24=pl5321hd8ed1ab_0
- perl-getopt-long=2.54=pl5321hdfd78af_0
- perl-inc-latest=0.500=pl5321ha770c72_0
- perl-io-compress=2.201=pl5321hdbdd923_2
- perl-io-zlib=1.14=pl5321hdfd78af_0
- perl-json=4.10=pl5321hdfd78af_0
- perl-json-xs=2.34=pl5321h4ac6f70_6
- perl-list-moreutils=0.430=pl5321hdfd78af_0
- perl-list-moreutils-xs=0.430=pl5321h031d066_2
- perl-module-build=0.4234=pl5321ha770c72_0
- perl-module-implementation=0.09=pl5321hdfd78af_3
- perl-module-metadata=1.000038=pl5321hdfd78af_0
- perl-module-runtime=0.016=pl5321hdfd78af_2
- perl-module-runtime-conflicts=0.003=pl5321hdfd78af_1
- perl-moo=2.005004=pl5321hdfd78af_0
- perl-moose=2.2202=pl5321hec16e2b_0
- perl-mro-compat=0.15=pl5321hdfd78af_0
- perl-package-deprecationmanager=0.17=pl5321hdfd78af_1
- perl-package-stash=0.40=pl5321h87f3376_1
- perl-package-stash-xs=0.30=pl5321h0b41bf4_0
- perl-parallel-forkmanager=2.02=pl5321hdfd78af_1
- perl-params-util=1.102=pl5321h9f5acd7_1
- perl-parent=0.236=pl5321hdfd78af_2
- perl-pathtools=3.75=pl5321hec16e2b_3
- perl-role-tiny=2.002004=pl5321hdfd78af_0
- perl-scalar-list-utils=1.62=pl5321hec16e2b_1
- perl-storable=3.15=pl5321hec16e2b_3
- perl-sub-exporter=0.988=pl5321hdfd78af_0
- perl-sub-exporter-progressive=0.001013=pl5321hdfd78af_1
- perl-sub-identify=0.14=pl5321hec16e2b_2
- perl-sub-install=0.928=pl5321hdfd78af_3
- perl-sub-name=0.21=pl5321hec16e2b_3
- perl-sub-quote=2.006006=pl5321hdfd78af_0
- perl-test-fatal=0.016=pl5321hdfd78af_0
- perl-try-tiny=0.31=pl5321hdfd78af_1
- perl-types-serialiser=1.01=pl5321hdfd78af_0
- perl-version=0.9924=pl5321hec16e2b_2
- perl-xsloader=0.24=pl5321hd8ed1ab_0
- perl-yaml=1.30=pl5321hdfd78af_0
- pip=23.1.2=py39h06a4308_0
- pixman=0.40.0=h7f8727e_1
- plac=1.3.4=pyhd3eb1b0_0
- platformdirs=2.5.2=py39h06a4308_0
- pluggy=1.0.0=py39h06a4308_1
- ply=3.11=py39h06a4308_0
- prettytable=3.5.0=py39h06a4308_0
- prodigal=2.6.3=h031d066_6
- protobuf=3.20.3=py39h6a678d5_0
- psutil=5.9.0=py39h5eee18b_0
- pulp=2.7.0=py39hf3d152e_0
- pyasn1=0.4.8=pyhd3eb1b0_0
- pyasn1-modules=0.2.8=py_0
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.15.1=py39h06a4308_1
- pynacl=1.5.0=py39h5eee18b_0
- pyopenssl=23.0.0=py39h06a4308_0
- pyparsing=3.0.9=py39h06a4308_0
- pyrsistent=0.18.0=py39heee7806_0
- pysam=0.21.0=py39h9abd093_0
- pysftp=0.2.9=pyhd3eb1b0_1
- pysocks=1.7.1=py39h06a4308_0
- pytest=7.3.1=py39h06a4308_0
- python=3.9.16=h7a1cb2a_2
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.16.2=py39h06a4308_0
- python-irodsclient=1.1.8=pyhd8ed1ab_0
- python_abi=3.9=2_cp39
- pytz=2022.7=py39h06a4308_0
- pyvcf=0.6.8=py39hde42818_1002
- pyyaml=6.0=py39h5eee18b_1
- r-argparse=2.1.5=r42h6115d3f_0
- r-base=4.2.2=hb87df5d_1
- r-cli=3.3.0=r42h884c59f_0
- r-colorspace=2.0_3=r42h76d94ec_0
- r-crayon=1.5.1=r42h6115d3f_0
- r-digest=0.6.29=r42h884c59f_0
- r-ellipsis=0.3.2=r42h76d94ec_0
- r-fansi=1.0.3=r42h76d94ec_0
- r-farver=2.1.0=r42h884c59f_0
- r-findpython=1.0.7=r42h6115d3f_0
- r-ggplot2=3.3.6=r42h6115d3f_0
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- r-isoband=0.2.5=r42h884c59f_0
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- r-lifecycle=1.0.1=r42h142f84f_0
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- r-mass=7.3_57=r42h76d94ec_0
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- r-mgcv=1.8_40=r42h76d94ec_0
- r-munsell=0.5.0=r42h6115d3f_0
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- r-rcolorbrewer=1.1_3=r42h6115d3f_0
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- r-vctrs=0.4.1=r42h884c59f_0
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- re2=2022.04.01=h295c915_0
- readline=8.2=h5eee18b_0
- requests=2.29.0=py39h06a4308_0
- reretry=0.11.8=pyhd8ed1ab_0
- rich=13.3.5=py39h06a4308_0
- rsa=4.7.2=pyhd3eb1b0_1
- s3transfer=0.6.0=py39h06a4308_0
- samtools=1.17=hd87286a_1
- scipy=1.11.3=py39heeff2f4_0
- sed=4.8=h7b6447c_0
- sepp=4.4.0=py39_0
- setuptools=67.8.0=py39h06a4308_0
- seqkit=2.5.1=h9ee0642_0
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- slacker=0.14.0=py_0
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- smmap=4.0.0=pyhd3eb1b0_0
- snakemake=7.21.0=hdfd78af_0
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- sniffles=2.0.7=pyhdfd78af_0
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- sqlite=3.41.2=h5eee18b_0
- stone=3.3.1=py39h06a4308_0
- stopit=1.1.2=py_0
- suitesparse=5.10.1=he2db622_2
- sysroot_linux-64=2.17=h57e8cba_10
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- tar=1.34=hb2e2bae_1
- tbb=2021.8.0=hdb19cb5_0
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- tk=8.6.12=h1ccaba5_0
- tktable=2.10=h14c3975_0
- tomli=2.0.1=py39h06a4308_0
- toposort=1.10=pyhd8ed1ab_0
- traitlets=5.7.1=py39h06a4308_0
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- ucsc-fatotwobit=447=h954228d_0
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- urllib3=1.26.16=py39h06a4308_0
- veracitools=0.1.3=py_0
- verkko=1.3.1=h64afbab_0
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- wfmash=0.10.3=hea8008d_2
- wget=1.21.4=h91b91d3_1
- wheel=0.38.4=py39h06a4308_0
- winnowmap=2.03=h43eeafb_2
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- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.6=h8ee46fc_0
- xorg-libxt=1.3.0=hd590300_0
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h27cfd23_1007
- xz=5.2.10=h5eee18b_1
- yahs=1.2a.2=he4a0461_2
- yaml=0.2.5=h7b6447c_0
- yarl=1.8.1=py39h5eee18b_0
- yte=1.5.1=pyha770c72_2
- zlib=1.2.13=hd590300_5
- zstd=1.5.5=hc292b87_0