fix binder permissions #32
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| name: Build and Test | |
| on: | |
| schedule: | |
| - cron: 0 */24 * * * | |
| workflow_dispatch: | |
| inputs: | |
| debug_enabled: | |
| type: boolean | |
| description: | |
| Run the build with tmate debugging enabled | |
| (https://github.com/marketplace/actions/debugging-with-tmate) | |
| required: false | |
| default: false | |
| pull_request: | |
| push: | |
| branches: [main] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build-geant4: | |
| runs-on: ${{ matrix.platform }} | |
| timeout-minutes: 60 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest] | |
| geant4-version: | |
| - 11.1.3 | |
| steps: | |
| - name: Install additional dependencies (ubuntu) | |
| if: matrix.platform == 'ubuntu-latest' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y build-essential git curl libexpat-dev libxerces-c-dev | |
| pip install cmake | |
| - name: Check Cache | |
| id: cache | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ github.workspace }}/geant4-install | |
| key: geant4-${{ matrix.geant4-version }}-${{ matrix.platform }} | |
| restore-keys: | | |
| geant4-${{ matrix.geant4-version }}-${{ matrix.platform }} | |
| - name: Build and Install Geant4 (without data) | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| git clone https://github.com/Geant4/geant4.git ${{ github.workspace }}/geant4-source --depth 1 --branch v${{ matrix.geant4-version }} | |
| mkdir -p ${{ github.workspace }}/geant4-source/build mkdir -p ${{ github.workspace }}/geant4-install | |
| cd ${{ github.workspace }}/geant4-source/build | |
| cmake .. -DCMAKE_INSTALL_PREFIX=${{ github.workspace }}/geant4-install -DCMAKE_CXX_STANDARD=20 -DCMAKE_BUILD_TYPE=Release -DGEANT4_USE_GDML=ON -DGEANT4_INSTALL_EXAMPLES=OFF -DGEANT4_INSTALL_DATA=OFF -DGEANT4_BUILD_TLS_MODEL=global-dynamic | |
| make install -j$(nproc) | |
| rm -rf ${{ github.workspace }}/geant4-source | |
| source ${{ github.workspace }}/geant4-install/bin/geant4.sh | |
| geant4-config --version | |
| - name: Cache Geant4 Installation | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ github.workspace }}/geant4-install | |
| key: geant4-${{ matrix.geant4-version }}-${{ matrix.platform }} | |
| restore-keys: | | |
| geant4-${{ matrix.geant4-version }}-${{ matrix.platform }} | |
| - name: Check after cache | |
| run: | | |
| ls -l ${{ github.workspace }}/geant4-install | |
| source ${{ github.workspace }}/geant4-install/bin/geant4.sh | |
| geant4-config --version | |
| geant4-config --prefix | |
| geant4-config --datasets | |
| - name: Check Cache | |
| id: cache-geant4-data | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ github.workspace }}/geant4-install/share/Geant4/data | |
| key: geant4-${{ matrix.geant4-version }}-data | |
| restore-keys: | | |
| geant4-${{ matrix.geant4-version }}-data | |
| - name: Install Geant4 data | |
| if: steps.cache-geant4-data.outputs.cache-hit != 'true' | |
| run: | | |
| source ${{ github.workspace }}/geant4-install/bin/geant4.sh | |
| geant4-config --install-datasets | |
| geant4-config --check-datasets | |
| - name: Cache Geant4 data | |
| if: steps.cache-geant4-data.outputs.cache-hit != 'true' | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ github.workspace }}/geant4-install/share/Geant4/data | |
| key: geant4-${{ matrix.geant4-version }}-data | |
| restore-keys: | | |
| geant4-${{ matrix.geant4-version }}-data | |
| build-test: | |
| needs: [build-geant4] | |
| timeout-minutes: 30 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest, macos-latest] | |
| geant4-version: | |
| - 11.1.3 | |
| python-version: | |
| - "3.9" | |
| - "3.10" | |
| - "3.11" | |
| runs-on: ${{ matrix.platform }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Get conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| miniforge-variant: Mambaforge | |
| use-mamba: true | |
| - name: Install Geant4 via conda | |
| run: | | |
| mamba env list | |
| mamba install -c conda-forge geant4=${{ matrix.geant4-version }} | |
| mamba list | |
| - name: Install additional dependencies (ubuntu) | |
| if: matrix.platform == 'ubuntu-latest' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y mesa-common-dev libglu1-mesa-dev python3-dev | |
| - name: Install additional dependencies (macos) | |
| if: matrix.platform == 'macos-latest' | |
| run: | | |
| mamba env list | |
| mamba install -c conda-forge zlib | |
| mamba list | |
| - name: pip install the package | |
| run: | | |
| export CMAKE_PREFIX_PATH=${CONDA_PREFIX} | |
| mamba env list | |
| mamba list | |
| pip install .[test] | |
| - name: Check imports | |
| run: | | |
| python -c "import geant4_python_application; geant4_python_application.Application()" | |
| - name: Setup tmate session | |
| uses: mxschmitt/action-tmate@v3 | |
| if: | |
| ${{ github.event_name == 'workflow_dispatch' && inputs.debug_enabled | |
| }} | |
| with: | |
| limit-access-to-actor: false | |
| - name: Run tests | |
| run: | | |
| python -m pytest -vv tests --reruns 3 --reruns-delay 30 --only-rerun "(?i)http|timeout|connection|socket|resolve" |