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  • University of Oxfrod
  • Oxford

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  1. ABM_flow_migrate_angio_v1_release ABM_flow_migrate_angio_v1_release Public

    An agent-based model of flow-mediated endothelial cell migration in a simple bifurcated vessel network. Published in PLoS Comp Biol (Feb 2021).

    Python 2

  2. ABM_flow_migrate_angio_v2_overlapping_ellipses_release ABM_flow_migrate_angio_v2_overlapping_ellipses_release Public

    An agent-based model of angiogenic remodelling based on force transmission between overlapping ellipses. Published in Front Cell Dev Biol (May 2022).

    Python 1

  3. AngioFE_original AngioFE_original Public

    AngioFE is a coupled model of neovessel growth with ECM mechanics, operating within the plug-in framework of FEBio. Please note this is the original 2015 and is now outdated, and has only been prov…

    C++ 1

  4. flow_migration_angio_ABM_original_MATLAB flow_migration_angio_ABM_original_MATLAB Public

    Original MATLAB version of the flow-coupled migration agent-based model

    MATLAB

  5. flow_idealised_ISV_network flow_idealised_ISV_network Public

    Network flow model of the zebrafish trunk vasculature (Control and Wasp Mutant data included) as part of the study presented by Rosa et. al. 2022 (https://journals.biologists.com/dev/article/149/3/…

    MATLAB