rendering everything following final~ish~ touches to home page

mackwhite · Jul 12, 2024 · d2f6c2d · d2f6c2d
1 parent 42026ee
commit d2f6c2d
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Showing 26 changed files with 1,015 additions and 60 deletions.
diff --git a/.Rproj.user/75F03E61/pcs/source-pane.pper b/.Rproj.user/75F03E61/pcs/source-pane.pper
@@ -1,3 +1,3 @@
 {
-    "activeTab": 1
+    "activeTab": 0
 }
diff --git a/.quarto/idx/index.qmd.json b/.quarto/idx/index.qmd.json
diff --git a/.quarto/xref/INDEX b/.quarto/xref/INDEX
@@ -22,5 +22,8 @@
   },
   "Pics.qmd": {
     "Pics.html": "2bafa9e6"
+  },
+  "background.qmd": {
+    "background.html": "646a5923"
   }
 }
diff --git a/_quarto.yml b/_quarto.yml
@@ -15,7 +15,7 @@ website:
         href: Research.qmd
       - text: "CV"
         href: CV.qmd
-      - text: "Field Work Memories"
+      - text: "From the Field"
         href: Pics.qmd
     right: 
       - icon: github

diff --git a/docs/CV.html b/docs/CV.html
@@ -97,7 +97,7 @@
   </li>  
   <li class="nav-item">
     <a class="nav-link" href="./Pics.html" rel="" target="">
- <span class="menu-text">Field Work Memories</span></a>
+ <span class="menu-text">From the Field</span></a>
   </li>  
 </ul>
             <ul class="navbar-nav navbar-nav-scroll ms-auto">

diff --git a/docs/News.html b/docs/News.html
@@ -36,10 +36,12 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" class="quarto-color-scheme" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-dark.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark.min.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
 <script id="quarto-search-options" type="application/json">{
   "location": "navbar",
   "copy-button": false,
@@ -62,7 +64,6 @@
 }</script>
 
 
-<link rel="stylesheet" href="styles.css">
 </head>
 
 <body class="nav-fixed">
@@ -85,10 +86,6 @@
   <li class="nav-item">
     <a class="nav-link" href="./index.html" rel="" target="">
  <span class="menu-text">Home</span></a>
-  </li>  
-  <li class="nav-item">
-    <a class="nav-link" href="./Projects.html" rel="" target="">
- <span class="menu-text">Projects</span></a>
   </li>  
   <li class="nav-item">
     <a class="nav-link" href="./Research.html" rel="" target="">
@@ -100,10 +97,22 @@
   </li>  
   <li class="nav-item">
     <a class="nav-link" href="./Pics.html" rel="" target="">
- <span class="menu-text">Fishy Field Work Pics</span></a>
+ <span class="menu-text">From the Field</span></a>
+  </li>  
+</ul>
+            <ul class="navbar-nav navbar-nav-scroll ms-auto">
+  <li class="nav-item compact">
+    <a class="nav-link" href="https://github.com/mackwhite" rel="" target=""><i class="bi bi-github" role="img">
+</i> 
+ <span class="menu-text"></span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="https://scholar.google.com/citations?user=hLHcmSYAAAAJ&amp;hl=en&amp;oi=sra" rel="" target="">
+ <span class="menu-text">Google Scholar</span></a>
   </li>  
 </ul>
-            <div class="quarto-navbar-tools ms-auto">
+            <div class="quarto-navbar-tools">
+  <a href="" class="quarto-color-scheme-toggle quarto-navigation-tool  px-1" onclick="window.quartoToggleColorScheme(); return false;" title="Toggle dark mode"><i class="bi"></i></a>
 </div>
           </div> <!-- /navcollapse -->
       </div> <!-- /container-fluid -->
@@ -169,6 +178,121 @@ <h3 class="anchored" data-anchor-id="coming-soon">Coming Soon</h3>
     }
   }
   toggleBodyColorPrimary();  
+  const disableStylesheet = (stylesheets) => {
+    for (let i=0; i < stylesheets.length; i++) {
+      const stylesheet = stylesheets[i];
+      stylesheet.rel = 'prefetch';
+    }
+  }
+  const enableStylesheet = (stylesheets) => {
+    for (let i=0; i < stylesheets.length; i++) {
+      const stylesheet = stylesheets[i];
+      stylesheet.rel = 'stylesheet';
+    }
+  }
+  const manageTransitions = (selector, allowTransitions) => {
+    const els = window.document.querySelectorAll(selector);
+    for (let i=0; i < els.length; i++) {
+      const el = els[i];
+      if (allowTransitions) {
+        el.classList.remove('notransition');
+      } else {
+        el.classList.add('notransition');
+      }
+    }
+  }
+  const toggleColorMode = (alternate) => {
+    // Switch the stylesheets
+    const alternateStylesheets = window.document.querySelectorAll('link.quarto-color-scheme.quarto-color-alternate');
+    manageTransitions('#quarto-margin-sidebar .nav-link', false);
+    if (alternate) {
+      enableStylesheet(alternateStylesheets);
+      for (const sheetNode of alternateStylesheets) {
+        if (sheetNode.id === "quarto-bootstrap") {
+          toggleBodyColorMode(sheetNode);
+        }
+      }
+    } else {
+      disableStylesheet(alternateStylesheets);
+      toggleBodyColorPrimary();
+    }
+    manageTransitions('#quarto-margin-sidebar .nav-link', true);
+    // Switch the toggles
+    const toggles = window.document.querySelectorAll('.quarto-color-scheme-toggle');
+    for (let i=0; i < toggles.length; i++) {
+      const toggle = toggles[i];
+      if (toggle) {
+        if (alternate) {
+          toggle.classList.add("alternate");     
+        } else {
+          toggle.classList.remove("alternate");
+        }
+      }
+    }
+    // Hack to workaround the fact that safari doesn't
+    // properly recolor the scrollbar when toggling (#1455)
+    if (navigator.userAgent.indexOf('Safari') > 0 && navigator.userAgent.indexOf('Chrome') == -1) {
+      manageTransitions("body", false);
+      window.scrollTo(0, 1);
+      setTimeout(() => {
+        window.scrollTo(0, 0);
+        manageTransitions("body", true);
+      }, 40);  
+    }
+  }
+  const isFileUrl = () => { 
+    return window.location.protocol === 'file:';
+  }
+  const hasAlternateSentinel = () => {  
+    let styleSentinel = getColorSchemeSentinel();
+    if (styleSentinel !== null) {
+      return styleSentinel === "alternate";
+    } else {
+      return false;
+    }
+  }
+  const setStyleSentinel = (alternate) => {
+    const value = alternate ? "alternate" : "default";
+    if (!isFileUrl()) {
+      window.localStorage.setItem("quarto-color-scheme", value);
+    } else {
+      localAlternateSentinel = value;
+    }
+  }
+  const getColorSchemeSentinel = () => {
+    if (!isFileUrl()) {
+      const storageValue = window.localStorage.getItem("quarto-color-scheme");
+      return storageValue != null ? storageValue : localAlternateSentinel;
+    } else {
+      return localAlternateSentinel;
+    }
+  }
+  let localAlternateSentinel = 'default';
+  // Dark / light mode switch
+  window.quartoToggleColorScheme = () => {
+    // Read the current dark / light value 
+    let toAlternate = !hasAlternateSentinel();
+    toggleColorMode(toAlternate);
+    setStyleSentinel(toAlternate);
+  };
+  // Ensure there is a toggle, if there isn't float one in the top right
+  if (window.document.querySelector('.quarto-color-scheme-toggle') === null) {
+    const a = window.document.createElement('a');
+    a.classList.add('top-right');
+    a.classList.add('quarto-color-scheme-toggle');
+    a.href = "";
+    a.onclick = function() { try { window.quartoToggleColorScheme(); } catch {} return false; };
+    const i = window.document.createElement("i");
+    i.classList.add('bi');
+    a.appendChild(i);
+    window.document.body.appendChild(a);
+  }
+  // Switch to dark mode if need be
+  if (hasAlternateSentinel()) {
+    toggleColorMode(true);
+  } else {
+    toggleColorMode(false);
+  }
   const icon = "";
   const anchorJS = new window.AnchorJS();
   anchorJS.options = {
@@ -380,6 +504,20 @@ <h3 class="anchored" data-anchor-id="coming-soon">Coming Soon</h3>
       });
     }
   }
+    var localhostRegex = new RegExp(/^(?:http|https):\/\/localhost\:?[0-9]*\//);
+      var filterRegex = new RegExp('/' + window.location.host + '/');
+    var isInternal = (href) => {
+        return filterRegex.test(href) || localhostRegex.test(href);
+    }
+    // Inspect non-navigation links and adorn them if external
+ 	var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item)');
+    for (var i=0; i<links.length; i++) {
+      const link = links[i];
+      if (!isInternal(link.href)) {
+          // target, if specified
+          link.setAttribute("target", "_blank");
+      }
+    }
 });
 </script>
 </div> <!-- /content -->

diff --git a/docs/Pics.html b/docs/Pics.html
@@ -97,7 +97,7 @@
   </li>  
   <li class="nav-item">
     <a class="nav-link active" href="./Pics.html" rel="" target="" aria-current="page">
- <span class="menu-text">Field Work Memories</span></a>
+ <span class="menu-text">From the Field</span></a>
   </li>  
 </ul>
             <ul class="navbar-nav navbar-nav-scroll ms-auto">