testing on server

mahmudhera · Aug 30, 2022 · f156f4d · f156f4d
1 parent bb6a93b
commit f156f4d
Showing 1 changed file with 8 additions and 2 deletions.
diff --git a/scripts/get_reference_genomes.py b/scripts/get_reference_genomes.py
@@ -201,8 +201,14 @@ def main():
             break
 
         # download selected genome and gbff
-        helper.download_FNA_file(path, current_directory_name)
-        helper.download_GBFF_file(path, current_directory_name)
+        try:
+            helper.download_FNA_file(path, current_directory_name)
+            helper.download_GBFF_file(path, current_directory_name)
+        except EOFError:
+            print(path, current_directory_name)
+            print('Exiting for now')
+            exit(-1)
+            continue
         total_downloaded += 1
         helper.return_to_original_direct()