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MHAP 2.0

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@skoren skoren released this 02 Mar 19:26
· 41 commits to master since this release

Changelog:

  • Up to 10X speedup (5x average).
  • Second-stage filter is now a bottom-sketch rather than random sampling, improving memory usage and speed.
  • Distance (1-identity) is reported from Jaccard score using the mash distance
  • Complete switch to fastutil collections API for speed/memory improvements.
  • Maven build system to consolidate into single jar and remove lib directory dependency.
  • Code cleanup.
  • Bug fixes.