diff --git a/marda_registry/data/extractors/rosettasciio.yaml b/marda_registry/data/extractors/rosettasciio.yaml new file mode 100644 index 0000000..a18771c --- /dev/null +++ b/marda_registry/data/extractors/rosettasciio.yaml @@ -0,0 +1,46 @@ +--- +id: >- + rosettaasciio +name: >- + RosettaSciIO +description: >- + The Rosetta Scientific Input Output library aims at providing easy reading and + writing capabilities in Python for a wide range of scientific data formats. Thus + providing an entry point to the wide ecosystem of python packages for scientific + data analysis and computation, as well as an interoperability between different + file formats. Just as the Rosetta stone provided a translation between ancient + Egyptian hieroglyphs and ancient Greek. The RosettaSciIO library originates from + the HyperSpy project for multi-dimensional data analysis. As HyperSpy is rooted + in the electron microscopy community, data formats used by this community are + still particularly well represented. +supported_filetypes: + - id: renishaw-wdf +license: + spdx: GPL-3.0-only +subject: + - raman + - electron-microscopy + - imaging +citations: + - uri: doi:10.5281/zenodo.592838 + title: HyperSpy + type: software +source_repository: https://github.com/hyperspy/rosettasciio +documentation: https://hyperspy.org/rosettasciio +usage: + - method: python + setup: rsciio + command: rsciio.renishaw.file_reader({{ input_path }}) + description: >- + This usage instruction is specifically for the renishaw-wdf file type. +installation: + - method: pip + packages: + - rosettasciio + - method: pip + packages: + - git+https://github.com/hyperspy/rosettasciio +instructions: >- + Install the package into a Python 3.9+ environment with + `pip install yadg`. After activating the environment, the + `extract` entrypoint will be available at the command-line. diff --git a/marda_registry/data/filetypes/renishaw-wdf.yml b/marda_registry/data/filetypes/renishaw-wdf.yml new file mode 100644 index 0000000..e721b96 --- /dev/null +++ b/marda_registry/data/filetypes/renishaw-wdf.yml @@ -0,0 +1,20 @@ +--- +id: >- + renishaw-wdf +name: >- + Renishaw WDF file +description: >- + A binary data file created by Renishaw Raman microscopes, optimised to handle + very large datasets of multiple (millions) of Raman spectra taken at points of + an optical image. +associated_vendors: + - Renishaw +subject: + - raman + - microscopy +associated_instruments: + - Renishaw inVia confocal Raman microscope + - Renishaw Virsa Raman analyser + - Renishaw RA800 benchtop Raman analyser +associated_software: + - Renishaw Windows-based Raman Environment (WiRE)