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@marislab

marislab

contact: Alvin Farrel (farrela@email.chop.edu)

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  1. pdx-mouse-subtraction pdx-mouse-subtraction Public

    Python 4

  2. epigenomics-data-descriptor epigenomics-data-descriptor Public

    Shell 4

  3. pdx-classification pdx-classification Public

    Applying Machine Learning Ras, NF1, and TP53 Classifiers to PDX model gene expression

    HTML 3 1

  4. create-pptc-pdx-oncoprints create-pptc-pdx-oncoprints Public

    As part of an overall strategy for improving therapies for childhood cancers, the PPTC seeks to develop models for the types of tumors that will be encountered in early phase clinical testing by es…

    R 3 2

  5. NBL-cell-line-RNA-seq NBL-cell-line-RNA-seq Public

    Forked from jharenza/NBL-cell-line-RNA-seq

    R 2

  6. create-pptc-pdx-corplots create-pptc-pdx-corplots Public

    R 2 1

Repositories

Showing 10 of 21 repositories
  • sCRAP_CommandLine Public

    selective Cross Reactive Antigen Presentation (command line version)

    marislab/sCRAP_CommandLine’s past year of commit activity
    R 0 0 0 0 Updated Feb 12, 2024
  • sCRAP Public

    selective Cross Reactive Antigen Presentation

    marislab/sCRAP’s past year of commit activity
    R 1 0 0 0 Updated Feb 12, 2024
  • mosse-lab-tools Public

    Various QoL tools and script snippets to aid researchers in the Mosse lab

    marislab/mosse-lab-tools’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 20, 2023
  • pptc-pdx-ethnicity-inference Public Forked from LauraEgolf/pptc-pdx-ethnicity-inference

    Ethnicity inference for Pediatric Preclinical Testing Consortium (PPTC) patient-derived xenograft models

    marislab/pptc-pdx-ethnicity-inference’s past year of commit activity
    R 0 BSD-3-Clause 3 0 0 Updated Oct 28, 2021
  • immunoprofile_shinyapp Public

    Shiny app for immunoprofiling across pediatric and adult tumors

    marislab/immunoprofile_shinyapp’s past year of commit activity
    R 0 0 0 0 Updated Mar 24, 2020
  • epigenomics-data-descriptor Public
    marislab/epigenomics-data-descriptor’s past year of commit activity
    Shell 4 BSD-3-Clause 0 0 0 Updated Mar 9, 2020
  • pptc-pdx-copy-number-and-SVs Public

    Indel and Breakpoints plots

    marislab/pptc-pdx-copy-number-and-SVs’s past year of commit activity
    R 0 BSD-3-Clause 0 0 0 Updated Dec 27, 2019
  • create-pptc-pdx-oncoprints Public

    As part of an overall strategy for improving therapies for childhood cancers, the PPTC seeks to develop models for the types of tumors that will be encountered in early phase clinical testing by establishing patient derived xenografts (PDXs) from high-risk childhood cancers refractory to current standard of care treatments. Genomic profiling of …

    marislab/create-pptc-pdx-oncoprints’s past year of commit activity
    R 3 2 0 0 Updated Dec 11, 2019
  • pptc-pdx-tmb Public
    marislab/pptc-pdx-tmb’s past year of commit activity
    R 0 BSD-3-Clause 0 0 0 Updated Sep 22, 2019
  • pptc-pdx-classifier-analysis Public
    marislab/pptc-pdx-classifier-analysis’s past year of commit activity
    R 0 BSD-3-Clause 0 0 0 Updated Sep 22, 2019
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