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Mazurowski Lab

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  1. finetune-SAM finetune-SAM Public

    This is an official repo for fine-tuning SAM to customized medical images.

    Python 152 23

  2. segment-anything-medical-evaluation segment-anything-medical-evaluation Public

    Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

    Python 149 18

  3. segmentation-guided-diffusion segmentation-guided-diffusion Public

    [MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.

    Python 118 6

  4. SegmentAnyBone SegmentAnyBone Public

    SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

    Python 66 16

  5. SlicerSegmentWithSAM SlicerSegmentWithSAM Public

    3D Slicer extension for Segment Anything Model (SAM) developed by Meta

    Python 47 6

  6. duke-dbt-data duke-dbt-data Public

    Jupyter Notebook 34 16

Repositories

Showing 10 of 28 repositories
  • SegmentAnyBone Public

    SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

    mazurowski-lab/SegmentAnyBone’s past year of commit activity
    Python 66 16 7 0 Updated Dec 23, 2024
  • SAM-TexturalConfusion-Metrics Public

    Metrics for object tree-likeness and textural contrast for semantic segmentation.

    mazurowski-lab/SAM-TexturalConfusion-Metrics’s past year of commit activity
    Python 3 Apache-2.0 0 0 0 Updated Dec 9, 2024
  • SlicerSegmentHumanBody Public

    3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

    mazurowski-lab/SlicerSegmentHumanBody’s past year of commit activity
    Python 2 3 0 0 Updated Dec 9, 2024
  • RaD Public

    RaD: a metric for comparing medical image distributions.

    mazurowski-lab/RaD’s past year of commit activity
    Python 2 Apache-2.0 0 0 0 Updated Dec 3, 2024
  • segmentation-guided-diffusion Public

    [MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.

    mazurowski-lab/segmentation-guided-diffusion’s past year of commit activity
    Python 118 6 4 0 Updated Dec 2, 2024
  • finetune-SAM Public

    This is an official repo for fine-tuning SAM to customized medical images.

    mazurowski-lab/finetune-SAM’s past year of commit activity
    Python 152 Apache-2.0 23 7 0 Updated Oct 18, 2024
  • SlicerSegmentWithSAM Public

    3D Slicer extension for Segment Anything Model (SAM) developed by Meta

    mazurowski-lab/SlicerSegmentWithSAM’s past year of commit activity
    Python 47 Apache-2.0 6 6 0 Updated Sep 23, 2024
  • intrinsic-properties Public

    [ICLR 2024] Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization and robustness.

    mazurowski-lab/intrinsic-properties’s past year of commit activity
    Python 16 Apache-2.0 2 0 0 Updated Sep 6, 2024
  • segment-anything2-medical-evaluation Public
    mazurowski-lab/segment-anything2-medical-evaluation’s past year of commit activity
    Python 7 2 1 0 Updated Aug 26, 2024
  • MRI-parameter-prediction Public

    (MIDL 2023) Code for "Reverse Engineering Breast MRIs: Predicting Acquisition Parameters Directly from Images"

    mazurowski-lab/MRI-parameter-prediction’s past year of commit activity
    Python 6 Apache-2.0 0 0 0 Updated Jun 27, 2024
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