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@EBI-Metagenomics

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  1. EBI-Metagenomics/nf-modules EBI-Metagenomics/nf-modules Public

    Microbiome Informatics NF modules and sufworkflows

    JavaScript 4 1

  2. EBI-Metagenomics/emg-viral-pipeline EBI-Metagenomics/emg-viral-pipeline Public

    VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

    Python 127 16

  3. EBI-Metagenomics/mettannotator EBI-Metagenomics/mettannotator Public

    Python 56 5

  4. EBI-Metagenomics/emgapi EBI-Metagenomics/emgapi Public

    MGnify RESTful API

    Python 10

  5. mjobs mjobs Public

    LSF/Slurm bjobs/squeue... but a bit nicer

    Python 1

  6. toad toad Public

    A very simple bulk task execution helper

    Python 1