This repository contains:
1)A Matlab implementation for the calculation of network entropy for the spatial ensemble (spatial.m) and the configuration ensemble (configuration.m), also implemented in a parallel computing version requiring the Matlab Parallel Toolbox (spatialp.m and configurationp.m respectively)
2)A small Python library (networkentropy.py) that gathers together the different ensemble calculations as functions, only in a parallelized version.
This program is distributed by the authors in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. If you use this code you should cite:
[1] G. Menichetti, G. Bianconi, G. Castellani, E. Giampieri, D. Remondini, "Multiscale characterization of ageing and cancer progression by a novel network entropy measure", Mol. BioSyst., 2015,11, 1824-1831 DOI: 10.1039/C5MB00143A
http://pubs.rsc.org/en/Content/ArticleLanding/2015/MB/C5MB00143A#!divAbstract
Further details and toy models in the supplementary materials.