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Add KDVH migration package
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Lun4m committed Nov 8, 2024
1 parent a172546 commit ec30e29
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12 changes: 12 additions & 0 deletions db/flags.sql
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Expand Up @@ -7,9 +7,21 @@ CREATE TABLE IF NOT EXISTS flags.kvdata (
corrected REAL NULL,
controlinfo TEXT NULL,
useinfo TEXT NULL,
-- TODO: check that this type is correct, it's stored as a string in Kvalobs?
cfailed INT4 NULL,
CONSTRAINT unique_kvdata_timeseries_obstime UNIQUE (timeseries, obstime)
);

CREATE INDEX IF NOT EXISTS kvdata_obtime_index ON flags.kvdata (obstime);
CREATE INDEX IF NOT EXISTS kvdata_timeseries_index ON flags.kvdata USING HASH (timeseries);

CREATE TABLE IF NOT EXISTS flags.kdvh (
timeseries INT4 REFERENCES public.timeseries,
obstime TIMESTAMPTZ NOT NULL,
controlinfo TEXT NULL,
useinfo TEXT NULL,
CONSTRAINT unique_kdvh_timeseries_obstime UNIQUE (timeseries, obstime)
);

CREATE INDEX IF NOT EXISTS kdvh_obtime_index ON flags.kdvh (obstime);
CREATE INDEX IF NOT EXISTS kdvh_timeseries_index ON flags.kdvh USING HASH (timeseries);
1 change: 1 addition & 0 deletions integration_tests/src/main.rs
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Expand Up @@ -37,6 +37,7 @@ async fn main() {
}
});

// NOTE: order matters
let schemas = ["db/public.sql", "db/labels.sql", "db/flags.sql"];
for schema in schemas {
insert_schema(&client, schema).await.unwrap();
Expand Down
7 changes: 7 additions & 0 deletions migrations/.gitignore
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*.txt
*.sh
migrate
tables*/
test_*/
.env
dumps/
27 changes: 27 additions & 0 deletions migrations/README.md
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# Migrations

Go package used to dump tables from old databases (KDVH, Kvalobs) and import them into LARD.

## Usage

1. Compile it with

```terminal
go build
```

1. Dump tables from KDVH

```terminal
./migrate kdvh dump --help
```

1. Import dumps into LARD

```terminal
./migrate kdvh import --help
```

## Other notes

Insightful talk on migrations: [here](https://www.youtube.com/watch?v=wqXqJfQMrqI&t=280s)
27 changes: 27 additions & 0 deletions migrations/go.mod
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module migrate

go 1.22.3

require (
github.com/gocarina/gocsv v0.0.0-20240520201108-78e41c74b4b1
github.com/jackc/pgx/v5 v5.6.0
github.com/jessevdk/go-flags v1.6.1
github.com/joho/godotenv v1.5.1
github.com/rickb777/period v1.0.5
github.com/schollz/progressbar/v3 v3.16.1
)

require (
github.com/govalues/decimal v0.1.29 // indirect
github.com/jackc/pgpassfile v1.0.0 // indirect
github.com/jackc/pgservicefile v0.0.0-20221227161230-091c0ba34f0a // indirect
github.com/jackc/puddle/v2 v2.2.1 // indirect
github.com/mitchellh/colorstring v0.0.0-20190213212951-d06e56a500db // indirect
github.com/rickb777/plural v1.4.2 // indirect
github.com/rivo/uniseg v0.4.7 // indirect
golang.org/x/crypto v0.25.0 // indirect
golang.org/x/sync v0.7.0 // indirect
golang.org/x/sys v0.26.0 // indirect
golang.org/x/term v0.25.0 // indirect
golang.org/x/text v0.16.0 // indirect
)
62 changes: 62 additions & 0 deletions migrations/go.sum
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github.com/chengxilo/virtualterm v1.0.4 h1:Z6IpERbRVlfB8WkOmtbHiDbBANU7cimRIof7mk9/PwM=
github.com/chengxilo/virtualterm v1.0.4/go.mod h1:DyxxBZz/x1iqJjFxTFcr6/x+jSpqN0iwWCOK1q10rlY=
github.com/davecgh/go-spew v1.1.0/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
github.com/davecgh/go-spew v1.1.1 h1:vj9j/u1bqnvCEfJOwUhtlOARqs3+rkHYY13jYWTU97c=
github.com/davecgh/go-spew v1.1.1/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
github.com/gocarina/gocsv v0.0.0-20240520201108-78e41c74b4b1 h1:FWNFq4fM1wPfcK40yHE5UO3RUdSNPaBC+j3PokzA6OQ=
github.com/gocarina/gocsv v0.0.0-20240520201108-78e41c74b4b1/go.mod h1:5YoVOkjYAQumqlV356Hj3xeYh4BdZuLE0/nRkf2NKkI=
github.com/google/go-cmp v0.6.0 h1:ofyhxvXcZhMsU5ulbFiLKl/XBFqE1GSq7atu8tAmTRI=
github.com/google/go-cmp v0.6.0/go.mod h1:17dUlkBOakJ0+DkrSSNjCkIjxS6bF9zb3elmeNGIjoY=
github.com/govalues/decimal v0.1.29 h1:GKC5g9y9oWxKIy51czdHTShOABwHm/shVuOVPwG415M=
github.com/govalues/decimal v0.1.29/go.mod h1:LUlHHucpCmA4rJfNrDvMgrWibDpYnDNWqJuNU1/gxW8=
github.com/jackc/pgpassfile v1.0.0 h1:/6Hmqy13Ss2zCq62VdNG8tM1wchn8zjSGOBJ6icpsIM=
github.com/jackc/pgpassfile v1.0.0/go.mod h1:CEx0iS5ambNFdcRtxPj5JhEz+xB6uRky5eyVu/W2HEg=
github.com/jackc/pgservicefile v0.0.0-20221227161230-091c0ba34f0a h1:bbPeKD0xmW/Y25WS6cokEszi5g+S0QxI/d45PkRi7Nk=
github.com/jackc/pgservicefile v0.0.0-20221227161230-091c0ba34f0a/go.mod h1:5TJZWKEWniPve33vlWYSoGYefn3gLQRzjfDlhSJ9ZKM=
github.com/jackc/pgx/v5 v5.6.0 h1:SWJzexBzPL5jb0GEsrPMLIsi/3jOo7RHlzTjcAeDrPY=
github.com/jackc/pgx/v5 v5.6.0/go.mod h1:DNZ/vlrUnhWCoFGxHAG8U2ljioxukquj7utPDgtQdTw=
github.com/jackc/puddle/v2 v2.2.1 h1:RhxXJtFG022u4ibrCSMSiu5aOq1i77R3OHKNJj77OAk=
github.com/jackc/puddle/v2 v2.2.1/go.mod h1:vriiEXHvEE654aYKXXjOvZM39qJ0q+azkZFrfEOc3H4=
github.com/jessevdk/go-flags v1.6.1 h1:Cvu5U8UGrLay1rZfv/zP7iLpSHGUZ/Ou68T0iX1bBK4=
github.com/jessevdk/go-flags v1.6.1/go.mod h1:Mk8T1hIAWpOiJiHa9rJASDK2UGWji0EuPGBnNLMooyc=
github.com/joho/godotenv v1.5.1 h1:7eLL/+HRGLY0ldzfGMeQkb7vMd0as4CfYvUVzLqw0N0=
github.com/joho/godotenv v1.5.1/go.mod h1:f4LDr5Voq0i2e/R5DDNOoa2zzDfwtkZa6DnEwAbqwq4=
github.com/mattn/go-runewidth v0.0.16 h1:E5ScNMtiwvlvB5paMFdw9p4kSQzbXFikJ5SQO6TULQc=
github.com/mattn/go-runewidth v0.0.16/go.mod h1:Jdepj2loyihRzMpdS35Xk/zdY8IAYHsh153qUoGf23w=
github.com/mitchellh/colorstring v0.0.0-20190213212951-d06e56a500db h1:62I3jR2EmQ4l5rM/4FEfDWcRD+abF5XlKShorW5LRoQ=
github.com/mitchellh/colorstring v0.0.0-20190213212951-d06e56a500db/go.mod h1:l0dey0ia/Uv7NcFFVbCLtqEBQbrT4OCwCSKTEv6enCw=
github.com/onsi/gomega v1.33.1 h1:dsYjIxxSR755MDmKVsaFQTE22ChNBcuuTWgkUDSubOk=
github.com/onsi/gomega v1.33.1/go.mod h1:U4R44UsT+9eLIaYRB2a5qajjtQYn0hauxvRm16AVYg0=
github.com/pmezard/go-difflib v1.0.0 h1:4DBwDE0NGyQoBHbLQYPwSUPoCMWR5BEzIk/f1lZbAQM=
github.com/pmezard/go-difflib v1.0.0/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
github.com/rickb777/period v1.0.5 h1:jAzlI2knYam5VMy0X8eYgqJBl0ew57N+J1djJSBOulM=
github.com/rickb777/period v1.0.5/go.mod h1:AmEwpgIShi3EEw34qbafoPJxVeRbv9VVtjLyOeRwK6c=
github.com/rickb777/plural v1.4.2 h1:Kl/syFGLFZ5EbuV8c9SVud8s5HI2HpCCtOMw2U1kS+A=
github.com/rickb777/plural v1.4.2/go.mod h1:kdmXUpmKBJTS0FtG/TFumd//VBWsNTD7zOw7x4umxNw=
github.com/rivo/uniseg v0.4.7 h1:WUdvkW8uEhrYfLC4ZzdpI2ztxP1I582+49Oc5Mq64VQ=
github.com/rivo/uniseg v0.4.7/go.mod h1:FN3SvrM+Zdj16jyLfmOkMNblXMcoc8DfTHruCPUcx88=
github.com/schollz/progressbar v1.0.0 h1:gbyFReLHDkZo8mxy/dLWMr+Mpb1MokGJ1FqCiqacjZM=
github.com/schollz/progressbar v1.0.0/go.mod h1:/l9I7PC3L3erOuz54ghIRKUEFcosiWfLvJv+Eq26UMs=
github.com/schollz/progressbar/v3 v3.16.1 h1:RnF1neWZFzLCoGx8yp1yF7SDl4AzNDI5y4I0aUJRrZQ=
github.com/schollz/progressbar/v3 v3.16.1/go.mod h1:I2ILR76gz5VXqYMIY/LdLecvMHDPVcQm3W/MSKi1TME=
github.com/stretchr/objx v0.1.0/go.mod h1:HFkY916IF+rwdDfMAkV7OtwuqBVzrE8GR6GFx+wExME=
github.com/stretchr/testify v1.3.0/go.mod h1:M5WIy9Dh21IEIfnGCwXGc5bZfKNJtfHm1UVUgZn+9EI=
github.com/stretchr/testify v1.7.0/go.mod h1:6Fq8oRcR53rry900zMqJjRRixrwX3KX962/h/Wwjteg=
github.com/stretchr/testify v1.9.0 h1:HtqpIVDClZ4nwg75+f6Lvsy/wHu+3BoSGCbBAcpTsTg=
github.com/stretchr/testify v1.9.0/go.mod h1:r2ic/lqez/lEtzL7wO/rwa5dbSLXVDPFyf8C91i36aY=
golang.org/x/crypto v0.25.0 h1:ypSNr+bnYL2YhwoMt2zPxHFmbAN1KZs/njMG3hxUp30=
golang.org/x/crypto v0.25.0/go.mod h1:T+wALwcMOSE0kXgUAnPAHqTLW+XHgcELELW8VaDgm/M=
golang.org/x/net v0.27.0 h1:5K3Njcw06/l2y9vpGCSdcxWOYHOUk3dVNGDXN+FvAys=
golang.org/x/net v0.27.0/go.mod h1:dDi0PyhWNoiUOrAS8uXv/vnScO4wnHQO4mj9fn/RytE=
golang.org/x/sync v0.7.0 h1:YsImfSBoP9QPYL0xyKJPq0gcaJdG3rInoqxTWbfQu9M=
golang.org/x/sync v0.7.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
golang.org/x/sys v0.26.0 h1:KHjCJyddX0LoSTb3J+vWpupP9p0oznkqVk/IfjymZbo=
golang.org/x/sys v0.26.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
golang.org/x/term v0.25.0 h1:WtHI/ltw4NvSUig5KARz9h521QvRC8RmF/cuYqifU24=
golang.org/x/term v0.25.0/go.mod h1:RPyXicDX+6vLxogjjRxjgD2TKtmAO6NZBsBRfrOLu7M=
golang.org/x/text v0.16.0 h1:a94ExnEXNtEwYLGJSIUxnWoxoRz/ZcCsV63ROupILh4=
golang.org/x/text v0.16.0/go.mod h1:GhwF1Be+LQoKShO3cGOHzqOgRrGaYc9AvblQOmPVHnI=
gopkg.in/check.v1 v0.0.0-20161208181325-20d25e280405/go.mod h1:Co6ibVJAznAaIkqp8huTwlJQCZ016jof/cbN4VW5Yz0=
gopkg.in/yaml.v3 v3.0.0-20200313102051-9f266ea9e77c/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=
gopkg.in/yaml.v3 v3.0.1 h1:fxVm/GzAzEWqLHuvctI91KS9hhNmmWOoWu0XTYJS7CA=
gopkg.in/yaml.v3 v3.0.1/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=
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