Small updates. #3389
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| name: Check Pipeline | |
| on: | |
| # manual dispatch | |
| workflow_dispatch: | |
| # run on PRs to master when - is opened, | |
| # new commit is pushed or is set as ready for review | |
| pull_request: | |
| types: [opened, synchronize, ready_for_review] | |
| branches: | |
| - master | |
| jobs: | |
| run_tests: | |
| runs-on: ubuntu-20.04 | |
| container: | |
| # use our base container | |
| # note that when a new dependency is added, | |
| # the image must be rebuild and published again | |
| image: ghcr.io/mild-blue/txmatching-conda-dependencies:1.0.29 | |
| timeout-minutes: 15 | |
| # disable run if the PR is draft (as our CLI creates PR as draft once the issue is in progress) | |
| if: github.event.pull_request.draft == false | |
| steps: | |
| - uses: actions/checkout@v2 | |
| # verify that the conda.yaml (dependencies file) in the repository | |
| # is the same as the one used in the docker image | |
| # if this step fails, update the base docker image and push it | |
| - name: Verify Conda consistency | |
| run: | | |
| diff -f conda.yml /app/conda.yml | |
| # initialize conda binary, conda env must be | |
| # activated in each step again | |
| - name: Setup Conda | |
| # define that we want to use bash | |
| # which is then reused | |
| shell: bash | |
| run: | | |
| conda --version | |
| conda env | |
| conda list | |
| conda init bash | |
| source ~/.bashrc | |
| - name: Verify Conda installation | |
| # use already existing instance of shell | |
| shell: bash -l {0} | |
| run: | | |
| conda activate txmatching | |
| conda list | |
| - name: Run Linter | |
| shell: bash -l {0} | |
| # conda activate txmatching must be called again in order to | |
| # activate it for the step | |
| run: | | |
| conda activate txmatching | |
| pylint txmatching local_testing_utilities | |
| - name: Execute tests | |
| shell: bash -l {0} | |
| env: | |
| ETRL_LOGIN: ${{ secrets.ETRL_LOGIN }} | |
| ETRL_PASSWORD: ${{ secrets.ETRL_PASSWORD }} | |
| run: | | |
| conda activate txmatching | |
| cd tests | |
| export PYTHONPATH=../ | |
| export LOGGING_DISABLE_LEVEL_FOR_TESTING=ERROR | |
| python -m unittest discover -s . -t . |