Fixes from review

mild-blue · Jan 18, 2024 · cfb9801 · cfb9801
1 parent 53dead6
commit cfb9801
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/local_testing_utilities/export-patients.http b/local_testing_utilities/export-patients.http
@@ -53,4 +53,4 @@ PUT {{url}}/v1/public/patient-upload
 Authorization: Bearer {{auth_token}}
 Content-Type: application/json
 
-< /home/honza/Downloads/Austrian Data 012024/wien_export.json
+< tmp.json
diff --git a/local_testing_utilities/notebooks/export_austrian_data.ipynb b/local_testing_utilities/notebooks/export_austrian_data.ipynb
@@ -16,7 +16,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "path = \"/home/honza/Downloads/Austrian Data 012024\"\n",
+    "path = \"\"\n",
     "donor_blood_group_file = \"\"\n",
     "txm_event_name = \"44-TXM-2024-01\"\n",
     "# starting_pattern = \"W-\"\n",

diff --git a/txmatching/patients/hla_functions.py b/txmatching/patients/hla_functions.py
@@ -395,7 +395,7 @@ def compute_cpra(unacceptable_antibodies: List[HLAAntibodyForCPRA]) -> float:
     We compute cPRA even if the http://ETRL.ORG/ endpoint has VPRA in it,
     but according to the consultation with Matěj Röder, these terms are equivalent for us.
     """
-    hla_codes_raw_for_cpra_calculation = [antibody_for_cpra.code_sent_to_calculator for antibody_for_cpra in unacceptable_antibodies]
+    hla_raw_codes_for_cpra_calculation = [antibody_for_cpra.code_sent_to_calculator for antibody_for_cpra in unacceptable_antibodies]
     etrl_login, etrl_password = os.getenv('ETRL_LOGIN'), os.getenv('ETRL_PASSWORD')
     if not etrl_login or not etrl_password:
         raise ValueError('http://ETRL.ORG/ login or password not found. '
@@ -410,7 +410,7 @@ def compute_cpra(unacceptable_antibodies: List[HLAAntibodyForCPRA]) -> float:
                     <VirtualPRA xmlns="http://ETRL.ORG/">
                         <sUserName>{etrl_login}</sUserName>
                         <sPassWord>{etrl_password}</sPassWord>
-                        <sUnacceptables>{', '.join(hla_codes_raw_for_cpra_calculation)}</sUnacceptables>
+                        <sUnacceptables>{', '.join(hla_raw_codes_for_cpra_calculation)}</sUnacceptables>
                     </VirtualPRA>
                 </soap:Body>
             </soap:Envelope>