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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,92 +1,223 @@ | ||
| name: null | ||
| name: subGemb_update | ||
| channels: | ||
| - pytorch | ||
| - anaconda | ||
| - conda-forge | ||
| - bioconda | ||
| - anaconda | ||
| - defaults | ||
| dependencies: | ||
| - _libgcc_mutex=0.1=main | ||
| - asn1crypto=1.3.0=py37_0 | ||
| - astroid=2.3.3=py37_0 | ||
| - backcall=0.1.0=py37_0 | ||
| - blas=1.0=mkl | ||
| - ca-certificates=2020.10.14=0 | ||
| - certifi=2020.6.20=py37_0 | ||
| - cudatoolkit=10.2.89=hfd86e86_1 | ||
| - freetype=2.10.4=h5ab3b9f_0 | ||
| - intel-openmp=2020.2=254 | ||
| - joblib=0.17.0=py_0 | ||
| - ca-certificates=2020.1.1=0 | ||
| - certifi=2020.4.5.1=py37_0 | ||
| - cffi=1.14.0=py37h2e261b9_0 | ||
| - chardet=3.0.4=py37_1003 | ||
| - cryptography=2.8=py37h1ba5d50_0 | ||
| - cudatoolkit=10.1.243=h6bb024c_0 | ||
| - entrypoints=0.3=py37_0 | ||
| - freetype=2.9.1=h8a8886c_1 | ||
| - intel-openmp=2020.0=166 | ||
| - ipykernel=5.1.4=py37h39e3cac_0 | ||
| - ipython=7.13.0=py37h5ca1d4c_0 | ||
| - ipython_genutils=0.2.0=py37_0 | ||
| - isort=4.3.21=py37_0 | ||
| - jedi=0.17.0=py37_0 | ||
| - jpeg=9b=h024ee3a_2 | ||
| - lcms2=2.11=h396b838_0 | ||
| - jupyter_client=6.1.3=py_0 | ||
| - jupyter_core=4.6.3=py37_0 | ||
| - lazy-object-proxy=1.4.3=py37h7b6447c_0 | ||
| - ld_impl_linux-64=2.33.1=h53a641e_7 | ||
| - libedit=3.1.20191231=h14c3975_1 | ||
| - libffi=3.3=he6710b0_2 | ||
| - libedit=3.1.20181209=hc058e9b_0 | ||
| - libffi=3.2.1=hd88cf55_4 | ||
| - libgcc-ng=9.1.0=hdf63c60_0 | ||
| - libgfortran-ng=7.5.0=hae1eefd_17 | ||
| - libgfortran4=7.5.0=hae1eefd_17 | ||
| - libllvm10=10.0.1=he513fc3_3 | ||
| - libgfortran-ng=7.3.0=hdf63c60_0 | ||
| - libpng=1.6.37=hbc83047_0 | ||
| - libsodium=1.0.16=h1bed415_0 | ||
| - libstdcxx-ng=9.1.0=hdf63c60_0 | ||
| - libtiff=4.1.0=h2733197_1 | ||
| - lz4-c=1.9.2=heb0550a_3 | ||
| - mkl=2020.2=256 | ||
| - libtiff=4.1.0=h2733197_0 | ||
| - mccabe=0.6.1=py37_1 | ||
| - mkl=2020.0=166 | ||
| - mkl-service=2.3.0=py37he904b0f_0 | ||
| - mkl_fft=1.2.0=py37h23d657b_0 | ||
| - mkl_random=1.1.1=py37h0573a6f_0 | ||
| - ncurses=6.2=he6710b0_1 | ||
| - ninja=1.10.1=py37hfd86e86_0 | ||
| - numba=0.51.2=py37h9fdb41a_0 | ||
| - numpy=1.19.2=py37h54aff64_0 | ||
| - numpy-base=1.19.2=py37hfa32c7d_0 | ||
| - mkl_fft=1.0.15=py37ha843d7b_0 | ||
| - mkl_random=1.1.0=py37hd6b4f25_0 | ||
| - ncurses=6.2=he6710b0_0 | ||
| - ninja=1.9.0=py37hfd86e86_0 | ||
| - numpy=1.18.1=py37h4f9e942_0 | ||
| - numpy-base=1.18.1=py37hde5b4d6_1 | ||
| - olefile=0.46=py37_0 | ||
| - openssl=1.1.1h=h7b6447c_0 | ||
| - pillow=8.0.1=py37he98fc37_0 | ||
| - pip=20.2.4=py37h06a4308_0 | ||
| - python=3.7.9=h7579374_0 | ||
| - openssl=1.1.1g=h7b6447c_0 | ||
| - pandas=1.0.1=py37hb3f55d8_0 | ||
| - parso=0.7.0=py_0 | ||
| - pexpect=4.8.0=py37_0 | ||
| - pickleshare=0.7.5=py37_0 | ||
| - pip=20.0.2=py37_1 | ||
| - prompt-toolkit=3.0.4=py_0 | ||
| - prompt_toolkit=3.0.4=0 | ||
| - ptyprocess=0.6.0=py37_0 | ||
| - pycparser=2.20=py_0 | ||
| - pygments=2.6.1=py_0 | ||
| - pylint=2.4.4=py37_0 | ||
| - pyopenssl=19.1.0=py37_0 | ||
| - pyreadr=0.2.6=py37hed695b0_0 | ||
| - pysocks=1.7.1=py37_0 | ||
| - python=3.7.6=h0371630_2 | ||
| - python-dateutil=2.8.1=py_0 | ||
| - python_abi=3.7=1_cp37m | ||
| - pytorch=1.6.0=py3.7_cuda10.2.89_cudnn7.6.5_0 | ||
| - readline=8.0=h7b6447c_0 | ||
| - scikit-learn=0.23.2=py37h0573a6f_0 | ||
| - setuptools=50.3.1=py37h06a4308_1 | ||
| - six=1.15.0=py37h06a4308_0 | ||
| - sqlite=3.33.0=h62c20be_0 | ||
| - tbb=2020.2=hc9558a2_0 | ||
| - threadpoolctl=2.1.0=pyh5ca1d4c_0 | ||
| - tk=8.6.10=hbc83047_0 | ||
| - torchvision=0.7.0=py37_cu102 | ||
| - umap-learn=0.4.6=py37hc8dfbb8_0 | ||
| - wheel=0.35.1=pyhd3eb1b0_0 | ||
| - xz=5.2.5=h7b6447c_0 | ||
| - pytorch=1.4.0=py3.7_cuda10.1.243_cudnn7.6.3_0 | ||
| - pytz=2019.3=py_0 | ||
| - pyzmq=18.1.1=py37he6710b0_0 | ||
| - readline=7.0=h7b6447c_5 | ||
| - requests=2.23.0=py37_0 | ||
| - scipy=1.4.1=py37h0b6359f_0 | ||
| - setuptools=45.2.0=py37_0 | ||
| - six=1.14.0=py37_0 | ||
| - sqlite=3.31.1=h7b6447c_0 | ||
| - tk=8.6.8=hbc83047_0 | ||
| - torchvision=0.5.0=py37_cu101 | ||
| - tornado=6.0.4=py37h7b6447c_1 | ||
| - traitlets=4.3.3=py37_0 | ||
| - urllib3=1.25.8=py37_0 | ||
| - wcwidth=0.1.9=py_0 | ||
| - wheel=0.34.2=py37_0 | ||
| - xz=5.2.4=h14c3975_4 | ||
| - zeromq=4.3.1=he6710b0_3 | ||
| - zlib=1.2.11=h7b6447c_3 | ||
| - zstd=1.4.5=h9ceee32_0 | ||
| - zstd=1.3.7=h0b5b093_0 | ||
| - pip: | ||
| - absl-py==0.9.0 | ||
| - alembic==1.4.2 | ||
| - arxiv-latex-cleaner==0.1.4 | ||
| - ase==3.20.1 | ||
| - cached-property==1.5.2 | ||
| - chardet==3.0.4 | ||
| - astunparse==1.6.3 | ||
| - attrs==19.3.0 | ||
| - bleach==3.1.5 | ||
| - cachetools==4.0.0 | ||
| - cliff==3.1.0 | ||
| - cmaes==0.5.0 | ||
| - cmd2==0.8.9 | ||
| - colorlog==4.1.0 | ||
| - colour==0.1.5 | ||
| - commentjson==0.8.3 | ||
| - coverage==5.1 | ||
| - cycler==0.10.0 | ||
| - decorator==4.4.2 | ||
| - cython==0.29.21 | ||
| - decorator==4.4.1 | ||
| - defusedxml==0.6.0 | ||
| - dill==0.3.1.1 | ||
| - docopt==0.6.2 | ||
| - fastdtw==0.3.4 | ||
| - filelock==3.0.12 | ||
| - future==0.18.2 | ||
| - geojson==2.5.0 | ||
| - goatools==1.0.5 | ||
| - google-auth==1.11.3 | ||
| - google-auth-oauthlib==0.4.1 | ||
| - googleapis-common-protos==1.52.0 | ||
| - googledrivedownloader==0.4 | ||
| - h5py==3.1.0 | ||
| - idna==2.10 | ||
| - grpcio==1.27.2 | ||
| - h5py==2.10.0 | ||
| - idna==2.8 | ||
| - imageio==2.8.0 | ||
| - importlib-metadata==1.6.0 | ||
| - ipywidgets==7.5.1 | ||
| - isodate==0.6.0 | ||
| - jieba==0.42.1 | ||
| - jinja2==2.11.2 | ||
| - kiwisolver==1.3.1 | ||
| - llvmlite==0.34.0 | ||
| - joblib==0.14.1 | ||
| - jsonschema==3.2.0 | ||
| - kiwisolver==1.1.0 | ||
| - lark-parser==0.7.8 | ||
| - llvmlite==0.31.0 | ||
| - lxml==4.5.1 | ||
| - mako==1.1.2 | ||
| - markdown==3.2.1 | ||
| - markupsafe==1.1.1 | ||
| - matplotlib==3.3.3 | ||
| - networkx==2.5 | ||
| - pandas==1.1.4 | ||
| - pyparsing==2.4.7 | ||
| - pytz==2020.4 | ||
| - rdflib==5.0.0 | ||
| - requests==2.25.0 | ||
| - scipy==1.5.4 | ||
| - torch-cluster==1.5.8 | ||
| - matplotlib==3.1.3 | ||
| - mistune==0.8.4 | ||
| - more-itertools==8.3.0 | ||
| - mpld3==0.3 | ||
| - nbconvert==5.6.1 | ||
| - nbformat==5.0.6 | ||
| - networkx==2.4 | ||
| - nlp==0.3.0 | ||
| - nltk==3.5 | ||
| - nose==1.3.7 | ||
| - notebook==6.0.3 | ||
| - numba==0.48.0 | ||
| - oauthlib==3.1.0 | ||
| - obonet==0.2.5 | ||
| - optuna==1.4.0 | ||
| - packaging==20.4 | ||
| - pandocfilters==1.4.2 | ||
| - patsy==0.5.1 | ||
| - pbr==5.4.5 | ||
| - pillow==7.0.0 | ||
| - pixiedust==1.1.18 | ||
| - pluggy==0.13.1 | ||
| - plyfile==0.7.1 | ||
| - prettytable==0.7.2 | ||
| - prometheus-client==0.8.0 | ||
| - promise==2.3 | ||
| - protobuf==3.11.3 | ||
| - py==1.8.1 | ||
| - pyarrow==0.16.0 | ||
| - pyasn1==0.4.8 | ||
| - pyasn1-modules==0.2.8 | ||
| - pydot==1.4.1 | ||
| - pyparsing==2.4.6 | ||
| - pyperclip==1.8.0 | ||
| - pyrsistent==0.16.0 | ||
| - pytest==5.4.2 | ||
| - pytest-cov==2.9.0 | ||
| - python-editor==1.0.4 | ||
| - python-graphviz==0.14 | ||
| - pytorch-crf==0.7.0 | ||
| - pytorch-lightning==0.7.1 | ||
| - pywavelets==1.1.1 | ||
| - pyyaml==5.3.1 | ||
| - rdflib==4.2.2 | ||
| - regex==2020.5.14 | ||
| - requests-oauthlib==1.3.0 | ||
| - revtok==0.0.3 | ||
| - rsa==4.0 | ||
| - sacremoses==0.0.43 | ||
| - scikit-image==0.16.2 | ||
| - scikit-learn==0.20.2 | ||
| - seaborn==0.10.1 | ||
| - send2trash==1.5.0 | ||
| - sentencepiece==0.1.91 | ||
| - snap-stanford==5.0.0 | ||
| - sqlalchemy==1.3.16 | ||
| - statsmodels==0.11.1 | ||
| - stevedore==1.32.0 | ||
| - tensorboard==2.2.0 | ||
| - tensorboard-plugin-wit==1.6.0.post2 | ||
| - tensorflow-datasets==3.2.1 | ||
| - tensorflow-estimator==2.3.0 | ||
| - tensorflow-metadata==0.22.2 | ||
| - termcolor==1.1.0 | ||
| - terminado==0.8.3 | ||
| - testpath==0.4.4 | ||
| - tokenizers==0.8.1rc1 | ||
| - torch==1.0.0 | ||
| - torch-cluster==1.5.4 | ||
| - torch-geometric==1.6.1 | ||
| - torch-scatter==2.0.5 | ||
| - torch-sparse==0.6.8 | ||
| - torch-scatter==2.0.4 | ||
| - torch-sparse==0.6.1 | ||
| - torch-spline-conv==1.2.0 | ||
| - tqdm==4.52.0 | ||
| - urllib3==1.26.2 | ||
| prefix: /home/ml499/miniconda3/envs/subgraph_update2 | ||
| - torchtext==0.4.0 | ||
| - torchviz==0.0.1 | ||
| - tqdm==4.28.1 | ||
| - transformers==3.0.2 | ||
| - typed-ast==1.4.1 | ||
| - webencodings==0.5.1 | ||
| - werkzeug==1.0.0 | ||
| - wget==3.2 | ||
| - widgetsnbextension==3.5.1 | ||
| - wrapt==1.11.2 | ||
| - xlrd==1.2.0 | ||
| - xlsxwriter==1.2.8 | ||
| - zipp==3.1.0 | ||
| prefix: /home/emilya/.conda/envs/subGemb_update | ||
|
|