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Code and Analysis from the PhD Thesis

Ramos-Rodríguez, M. (2020). β-cells cis-regulatory networks and type 1 diabetes (Unpublished doctoral dissertation). Universitat de Barcelona, Barcelona, Spain.

This repository contains a workflowr project that gathers all scripts and analyses performed during my PhD thesis. Results have been gathered in three different publications:

Colli, M.L., Ramos-Rodríguez, M., Nakayasu, E.S. et al. An integrated multi-omics approach identifies the landscape of interferon-$\alpha$-mediated responses of human pancreatic beta cells. Nat Commun. 11, 2584 (2020). https://doi.org/10.1038/s41467-020-16327-0

Ramos-Rodríguez, M., Raurell-Vila, H., Colli, M.L. et al. The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes. Nat Genet. 51, 1588–1595 (2019). https://doi.org/10.1038/s41588-019-0524-6

Mularoni L., Ramos-Rodríguez M. and Pasquali L. The Pancreatic Islet Regulome Browser. Front. Genet. 8 (2017). https://doi.org/10.3389/fgene.2017.00013