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Makefile.am
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Makefile.am
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ACLOCAL_AMFLAGS=-I m4
SUBDIRS = src Utils lib man
## doxygen documentation
include $(top_srcdir)/aminclude.am
matrices_DATA=\
Matrices/RIBOSUM85_60
#Matrices/RIBOSUM100_25 Matrices/RIBOSUM100_30 Matrices/RIBOSUM100_35 Matrices/RIBOSUM100_40 \
Matrices/RIBOSUM100_45 Matrices/RIBOSUM100_50 Matrices/RIBOSUM100_55 Matrices/RIBOSUM100_60 \
Matrices/RIBOSUM100_65 Matrices/RIBOSUM100_70 Matrices/RIBOSUM100_75 Matrices/RIBOSUM100_80 \
Matrices/RIBOSUM100_85 Matrices/RIBOSUM100_90 Matrices/RIBOSUM100_95 \
Matrices/RIBOSUM45_25 Matrices/RIBOSUM45_30 Matrices/RIBOSUM45_35 Matrices/RIBOSUM45_40 \
Matrices/RIBOSUM45_45 Matrices/RIBOSUM45_50 Matrices/RIBOSUM45_55 Matrices/RIBOSUM45_60 \
Matrices/RIBOSUM45_65 Matrices/RIBOSUM45_70 Matrices/RIBOSUM45_75 Matrices/RIBOSUM45_80 \
Matrices/RIBOSUM45_85 Matrices/RIBOSUM45_90 Matrices/RIBOSUM45_95 \
Matrices/RIBOSUM50_25 Matrices/RIBOSUM50_30 Matrices/RIBOSUM50_35 Matrices/RIBOSUM50_40 \
Matrices/RIBOSUM50_45 Matrices/RIBOSUM50_50 Matrices/RIBOSUM50_55 Matrices/RIBOSUM50_60 \
Matrices/RIBOSUM50_65 Matrices/RIBOSUM50_70 Matrices/RIBOSUM50_75 Matrices/RIBOSUM50_80 \
Matrices/RIBOSUM50_85 Matrices/RIBOSUM50_90 Matrices/RIBOSUM50_95 \
Matrices/RIBOSUM55_25 Matrices/RIBOSUM55_30 Matrices/RIBOSUM55_35 Matrices/RIBOSUM55_40 \
Matrices/RIBOSUM55_45 Matrices/RIBOSUM55_50 Matrices/RIBOSUM55_55 Matrices/RIBOSUM55_60 \
Matrices/RIBOSUM55_65 Matrices/RIBOSUM55_70 Matrices/RIBOSUM55_75 Matrices/RIBOSUM55_80 \
Matrices/RIBOSUM55_85 Matrices/RIBOSUM55_90 Matrices/RIBOSUM55_95 \
Matrices/RIBOSUM60_25 Matrices/RIBOSUM60_30 Matrices/RIBOSUM60_35 Matrices/RIBOSUM60_40 \
Matrices/RIBOSUM60_45 Matrices/RIBOSUM60_50 Matrices/RIBOSUM60_55 Matrices/RIBOSUM60_60 \
Matrices/RIBOSUM60_65 Matrices/RIBOSUM60_70 Matrices/RIBOSUM60_75 Matrices/RIBOSUM60_80 \
Matrices/RIBOSUM60_85 Matrices/RIBOSUM60_90 Matrices/RIBOSUM60_95 \
Matrices/RIBOSUM65_25 Matrices/RIBOSUM65_30 Matrices/RIBOSUM65_35 Matrices/RIBOSUM65_40 \
Matrices/RIBOSUM65_45 Matrices/RIBOSUM65_50 Matrices/RIBOSUM65_55 Matrices/RIBOSUM65_60 \
Matrices/RIBOSUM65_65 Matrices/RIBOSUM65_70 Matrices/RIBOSUM65_75 Matrices/RIBOSUM65_80 \
Matrices/RIBOSUM65_85 Matrices/RIBOSUM65_90 Matrices/RIBOSUM65_95 \
Matrices/RIBOSUM70_25 Matrices/RIBOSUM70_30 Matrices/RIBOSUM70_35 Matrices/RIBOSUM70_40 \
Matrices/RIBOSUM70_45 Matrices/RIBOSUM70_50 Matrices/RIBOSUM70_55 Matrices/RIBOSUM70_60 \
Matrices/RIBOSUM70_65 Matrices/RIBOSUM70_70 Matrices/RIBOSUM70_75 Matrices/RIBOSUM70_80 \
Matrices/RIBOSUM70_85 Matrices/RIBOSUM70_90 Matrices/RIBOSUM70_95 \
Matrices/RIBOSUM75_25 Matrices/RIBOSUM75_30 Matrices/RIBOSUM75_35 Matrices/RIBOSUM75_40 \
Matrices/RIBOSUM75_45 Matrices/RIBOSUM75_50 Matrices/RIBOSUM75_55 Matrices/RIBOSUM75_60 \
Matrices/RIBOSUM75_65 Matrices/RIBOSUM75_70 Matrices/RIBOSUM75_75 Matrices/RIBOSUM75_80 \
Matrices/RIBOSUM75_85 Matrices/RIBOSUM75_90 Matrices/RIBOSUM75_95 \
Matrices/RIBOSUM80_25 Matrices/RIBOSUM80_30 Matrices/RIBOSUM80_35 Matrices/RIBOSUM80_40 \
Matrices/RIBOSUM80_45 Matrices/RIBOSUM80_50 Matrices/RIBOSUM80_55 Matrices/RIBOSUM80_60 \
Matrices/RIBOSUM80_65 Matrices/RIBOSUM80_70 Matrices/RIBOSUM80_75 Matrices/RIBOSUM80_80 \
Matrices/RIBOSUM80_85 Matrices/RIBOSUM80_90 Matrices/RIBOSUM80_95 \
Matrices/RIBOSUM85_25 Matrices/RIBOSUM85_30 Matrices/RIBOSUM85_35 Matrices/RIBOSUM85_40 \
Matrices/RIBOSUM85_45 Matrices/RIBOSUM85_50 Matrices/RIBOSUM85_55 Matrices/RIBOSUM85_60 \
Matrices/RIBOSUM85_65 Matrices/RIBOSUM85_70 Matrices/RIBOSUM85_75 Matrices/RIBOSUM85_80 \
Matrices/RIBOSUM85_85 Matrices/RIBOSUM85_90 Matrices/RIBOSUM85_95 \
Matrices/RIBOSUM90_25 Matrices/RIBOSUM90_30 Matrices/RIBOSUM90_35 Matrices/RIBOSUM90_40 \
Matrices/RIBOSUM90_45 Matrices/RIBOSUM90_50 Matrices/RIBOSUM90_55 Matrices/RIBOSUM90_60 \
Matrices/RIBOSUM90_65 Matrices/RIBOSUM90_70 Matrices/RIBOSUM90_75 Matrices/RIBOSUM90_80 \
Matrices/RIBOSUM90_85 Matrices/RIBOSUM90_90 Matrices/RIBOSUM90_95 \
Matrices/RIBOSUM95_25 Matrices/RIBOSUM95_30 Matrices/RIBOSUM95_35 Matrices/RIBOSUM95_40 \
Matrices/RIBOSUM95_45 Matrices/RIBOSUM95_50 Matrices/RIBOSUM95_55 Matrices/RIBOSUM95_60 \
Matrices/RIBOSUM95_65 Matrices/RIBOSUM95_70 Matrices/RIBOSUM95_75 Matrices/RIBOSUM95_80 \
Matrices/RIBOSUM95_85 Matrices/RIBOSUM95_90 Matrices/RIBOSUM95_95
matricesdir=$(prefix)/share/locarna/Matrices
EXTRA_DIST= Examples/archaea.fa Examples/ferritin.fa \
Examples/haca.snoRNA.fa Examples/hammerhead_3.fa \
Examples/gcvT.fa $(matrices_DATA) $(params_DATA) doxygen.cfg