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Change DiploidMetadata to incorporate a unique individual ID #1167

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wants to merge 21 commits into from
Closed

Change DiploidMetadata to incorporate a unique individual ID #1167

wants to merge 21 commits into from

Commits on Aug 16, 2023

  1. Change DiploidMetadata to incorporate a unique individual ID

    @molpopgen
    molpopgen committed Aug 16, 2023
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  2. package compiles now, but things are very wrong

    @molpopgen
    molpopgen committed Aug 16, 2023
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  3. compile now w/all symbols

    @molpopgen
    molpopgen committed Aug 16, 2023
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  4. c++ tests now pass

    @molpopgen
    molpopgen committed Aug 16, 2023
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  5. failing Python-side test

    @molpopgen
    molpopgen committed Aug 16, 2023
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  6. make the id visible from Py

    @molpopgen
    molpopgen committed Aug 16, 2023
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  7. another fail

    @molpopgen
    molpopgen committed Aug 16, 2023
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  8. update the dtype

    @molpopgen
    molpopgen committed Aug 16, 2023
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  9. fix narrowing conversion

    @molpopgen
    molpopgen committed Aug 16, 2023
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  10. update the next individual id

    @molpopgen
    molpopgen committed Aug 16, 2023
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  11. add checks

    @molpopgen
    molpopgen committed Aug 16, 2023
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  12. update tskit schema for individual metadata

    @molpopgen
    molpopgen committed Aug 16, 2023
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  13. redundantly passing in parental metadata

    @molpopgen
    molpopgen committed Aug 16, 2023
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  14. fix test

    @molpopgen
    molpopgen committed Aug 16, 2023
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  15. add C++-side tests of individual id assignment

    @molpopgen
    molpopgen committed Aug 16, 2023
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  16. fix diploid metadata pickling

    @molpopgen
    molpopgen committed Aug 16, 2023
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  17. fix metadata encoding

    @molpopgen
    molpopgen committed Aug 16, 2023
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  18. update test

    @molpopgen
    molpopgen committed Aug 16, 2023
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  19. fix cast

    @molpopgen
    molpopgen committed Aug 16, 2023
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  20. fix cast, test now passes

    @molpopgen
    molpopgen committed Aug 16, 2023
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  21. throw error where our problem lies

    @molpopgen
    molpopgen committed Aug 16, 2023
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