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@mpg-age-bioinformatics

Bioinformatics Core Facility of the Max Planck Institute for Biology of Ageing

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  1. htseq-tools htseq-tools Public

    This repository hosts scripts and tools for analysis of high throughput sequencing data.

    Shell 5 5

  2. AGEpy AGEpy Public

    Bioinformatics tools for Python

    Python 23 3

  3. cluster_first_steps cluster_first_steps Public

    Using the local cluster at the MPI-AGE.

    Shell 4

  4. ENCODE_RNAseq_eCLIP ENCODE_RNAseq_eCLIP Public

    Integration of RNAseq and eCLIP data from ENCODE. An example with KHSRP.

    HTML 1

  5. bit bit Public

    The [b]ermuda [i]nformation [t]riangle is a git-based tool for the management of code and data.

    Python 3 1

  6. software_docker software_docker Public

    Dockerfiles used to create the docker images containing most of the software we use.

    Dockerfile 1 3

Repositories

Showing 10 of 86 repositories
  • mpg-age-bioinformatics/nf-featurecounts’s past year of commit activity
    Nextflow 0 0 0 0 Updated Nov 18, 2024
  • software Public
    mpg-age-bioinformatics/software’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Nov 18, 2024
  • mpg-age-bioinformatics/nf-deseq2’s past year of commit activity
    Nextflow 0 0 1 0 Updated Nov 13, 2024
  • AGEpy Public

    Bioinformatics tools for Python

    mpg-age-bioinformatics/AGEpy’s past year of commit activity
    Python 23 MIT 3 3 2 Updated Nov 13, 2024
  • flaski Public

    Get your science on a leash!

    mpg-age-bioinformatics/flaski’s past year of commit activity
    Python 29 MIT 10 21 1 Updated Nov 13, 2024
  • pyflaski Public
    mpg-age-bioinformatics/pyflaski’s past year of commit activity
    Jupyter Notebook 1 MIT 0 2 0 Updated Nov 13, 2024
  • myapp Public

    A backbone for flask-dash based apps.

    mpg-age-bioinformatics/myapp’s past year of commit activity
    Python 2 MIT 0 4 77 Updated Nov 8, 2024
  • mpg-age-bioinformatics/myapp-gtex’s past year of commit activity
    Python 0 0 0 0 Updated Oct 4, 2024
  • mpg-age-bioinformatics/mpg-age-bioinformatics.github.io’s past year of commit activity
    HTML 0 Apache-2.0 2 1 6 Updated Sep 27, 2024
  • mpg-age-bioinformatics/nf-crisprcleanr’s past year of commit activity
    Nextflow 0 0 0 0 Updated Sep 24, 2024

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