-
Notifications
You must be signed in to change notification settings - Fork 1
/
environment.yml
176 lines (175 loc) · 4.33 KB
/
environment.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
name: 3DCellComposer
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- bzip2=1.0.8=hd590300_5
- ca-certificates=2023.08.22=h06a4308_0
- ld_impl_linux-64=2.40=h41732ed_0
- libffi=3.4.4=h6a678d5_0
- libgcc-ng=13.2.0=h807b86a_3
- libgomp=13.2.0=h807b86a_3
- libnsl=2.0.1=hd590300_0
- libsqlite=3.44.0=h2797004_0
- libstdcxx-ng=13.2.0=h7e041cc_3
- libuuid=2.38.1=h0b41bf4_0
- libzlib=1.2.13=hd590300_5
- ncurses=6.4=h59595ed_2
- openssl=3.1.4=hd590300_0
- pip=23.3.1=pyhd8ed1ab_0
- python=3.8.18=hd12c33a_0_cpython
- readline=8.2=h8228510_1
- setuptools=68.2.2=pyhd8ed1ab_0
- tk=8.6.13=noxft_h4845f30_101
- wheel=0.41.3=pyhd8ed1ab_0
- xz=5.4.2=h5eee18b_0
- pip:
- absl-py==2.0.0
- anyio==4.0.0
- argon2-cffi==23.1.0
- argon2-cffi-bindings==21.2.0
- arrow==1.3.0
- asttokens==2.4.1
- astunparse==1.6.3
- async-lru==2.0.4
- attrs==23.1.0
- babel==2.13.1
- backcall==0.2.0
- cachetools==5.3.2
- certifi==2023.7.22
- cffi==1.16.0
- charset-normalizer==3.3.2
- comm==0.2.0
- contourpy==1.1.1
- cycler==0.12.1
- cython==0.29.36
- debugpy==1.8.0
- decorator==5.1.1
- deepcell==0.12.6
- deepcell-toolbox==0.12.1
- deepcell-tracking==0.6.4
- exceptiongroup==1.1.3
- executing==2.0.1
- flatbuffers==23.5.26
- fonttools==4.44.3
- fqdn==1.5.1
- gast==0.5.4
- google-auth==2.23.4
- google-auth-oauthlib==0.4.6
- google-pasta==0.2.0
- grpcio==1.59.3
- h5py==3.10.0
- idna==3.4
- imageio==2.32.0
- importlib-metadata==6.8.0
- importlib-resources==6.1.1
- ipykernel==6.26.0
- ipython==8.12.3
- ipywidgets==8.1.1
- isoduration==20.11.0
- jedi==0.19.1
- jinja2==3.1.2
- joblib==1.3.2
- json5==0.9.14
- jsonpointer==2.4
- jsonschema==4.20.0
- jsonschema-specifications==2023.11.1
- jupyter==1.0.0
- jupyter-console==6.6.3
- jupyter-events==0.9.0
- jupyter-lsp==2.2.0
- jupyter-server==2.10.1
- jupyter-server-terminals==0.4.4
- jupyterlab==4.0.8
- jupyterlab-server==2.25.1
- jupyterlab-widgets==3.0.9
- keras==2.8.0
- keras-preprocessing==1.1.2
- kiwisolver==1.4.5
- libclang==16.0.6
- lxml==4.9.3
- markdown==3.5.1
- markupsafe==2.1.3
- matplotlib==3.7.3
- matplotlib-inline==0.1.6
- nest-asyncio==1.5.8
- networkx==3.1
- notebook==7.0.6
- notebook-shim==0.2.3
- numpy==1.23.5
- oauthlib==3.2.2
- opencv-python-headless==4.8.1.78
- opt-einsum==3.3.0
- overrides==7.4.0
- packaging==23.2
- pandas==2.0.3
- parso==0.8.3
- pexpect==4.8.0
- pickleshare==0.7.5
- pillow==10.0.1
- pkgutil-resolve-name==1.3.10
- prometheus-client==0.18.0
- prompt-toolkit==3.0.41
- protobuf==3.19.6
- psutil==5.9.6
- ptyprocess==0.7.0
- pure-eval==0.2.2
- pyasn1==0.5.0
- pyasn1-modules==0.3.0
- pycparser==2.21
- pydot==1.4.2
- pyparsing==3.1.1
- python-dateutil==2.8.2
- python-json-logger==2.0.7
- pytz==2023.3.post1
- pywavelets==1.4.1
- pyyaml==6.0.1
- qtconsole==5.5.1
- qtpy==2.4.1
- referencing==0.31.0
- requests==2.31.0
- requests-oauthlib==1.3.1
- rfc3339-validator==0.1.4
- rfc3986-validator==0.1.1
- rpds-py==0.13.0
- rsa==4.9
- scikit-image==0.19.3
- scikit-learn==1.3.2
- scipy==1.10.1
- send2trash==1.8.2
- six==1.16.0
- sniffio==1.3.0
- spektral==1.0.6
- stack-data==0.6.3
- tensorboard==2.8.0
- tensorboard-data-server==0.6.1
- tensorboard-plugin-wit==1.8.1
- tensorflow==2.8.4
- tensorflow-addons==0.16.1
- tensorflow-estimator==2.8.0
- tensorflow-io-gcs-filesystem==0.34.0
- termcolor==2.3.0
- terminado==0.18.0
- threadpoolctl==3.2.0
- tifffile==2023.7.10
- tomli==2.0.1
- tornado==6.3.3
- tqdm==4.66.1
- traitlets==5.13.0
- typeguard==4.1.5
- types-python-dateutil==2.8.19.14
- typing-extensions==4.8.0
- tzdata==2023.3
- uri-template==1.3.0
- urllib3==2.1.0
- wcwidth==0.2.10
- webcolors==1.13
- websocket-client==1.6.4
- werkzeug==3.0.1
- widgetsnbextension==4.0.9
- wrapt==1.16.0
- zipp==3.17.0
prefix: /home/hrchen/anaconda3/envs/3DCellComposer