Change type of layer Metadata from Dict to Mapping #1522
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- main | |
tags: | |
- "v*" | |
pull_request: {} | |
workflow_dispatch: | |
concurrency: | |
group: test-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
check-manifest: | |
name: Check Manifest | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Check | |
run: pipx run check-manifest | |
test: | |
name: ${{ matrix.platform }} (${{ matrix.python-version }}) ${{ matrix.pydantic }} | |
runs-on: ${{ matrix.platform }} | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: [3.8, 3.9, "3.10", "3.11"] | |
platform: [ubuntu-latest, macos-latest, windows-latest] | |
pydantic: ["pydantic<2", "pydantic>2"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install "${{ matrix.pydantic }}" | |
pip install -e .[json,docs,testing] | |
- name: Test Main docs build | |
run: pytest --color yes -m github_main_only | |
- name: Test | |
run: | | |
coverage run --source=npe2 -m pytest --color yes | |
- name: Upload coverage as artifact | |
uses: actions/upload-artifact@v4 | |
with: | |
name: coverage reports ${{ matrix.platform }} py ${{ matrix.python-version }} ${{ (matrix.pydantic == 'pydantic<2' && 'pydantic_lt_2') || 'pydantic_gt_2' }} | |
path: | | |
./.coverage.* | |
include-hidden-files: true | |
test_napari: | |
name: napari tests | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/checkout@v4 | |
with: | |
repository: napari/napari | |
path: napari-from-github | |
fetch-depth: 0 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Install | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install -e ./napari-from-github -c "./napari-from-github/resources/constraints/constraints_py3.10.txt" | |
python -m pip install -e .[json] | |
# bare minimum required to test napari/plugins | |
python -m pip install pytest pytest-pretty scikit-image[data] zarr xarray hypothesis matplotlib | |
- name: Run napari plugin headless tests | |
run: pytest -W 'ignore::DeprecationWarning' napari/plugins napari/settings napari/layers napari/components | |
working-directory: napari-from-github | |
test_docs_render: | |
name: docs render | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.x" | |
- name: Build schema | |
run: | | |
python -m pip install --upgrade pip | |
pip install -e .[docs] check-jsonschema | |
python -m npe2.manifest.schema > _schema.json | |
check-jsonschema --check-metaschema _schema.json | |
- name: Test rendering docs | |
run: python _docs/render.py | |
env: | |
NPE2_SCHEMA: "_schema.json" | |
upload_coverage: | |
needs: test | |
name: Upload coverage | |
if: always() | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.x" | |
cache-dependency-path: setup.cfg | |
cache: 'pip' | |
- name: Install Dependencies | |
run: | | |
pip install --upgrade pip | |
pip install codecov | |
- name: Download coverage data | |
uses: actions/download-artifact@v4 | |
with: | |
pattern: coverage reports* | |
path: coverage | |
merge-multiple: true | |
- name: combine coverage data | |
run: | | |
python -Im coverage combine coverage | |
python -Im coverage xml -o coverage.xml | |
# Report and write to summary. | |
python -Im coverage report --format=markdown --skip-empty --skip-covered >> $GITHUB_STEP_SUMMARY | |
- name: Upload coverage data | |
uses: codecov/codecov-action@v4 | |
with: | |
fail_ci_if_error: true | |
token: ${{ secrets.CODECOV_TOKEN }} | |
deploy: | |
name: Deploy | |
needs: test | |
if: "success() && startsWith(github.ref, 'refs/tags/')" | |
runs-on: ubuntu-latest | |
permissions: | |
contents: write | |
id-token: write | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.x" | |
- name: install | |
run: | | |
git tag | |
pip install -U pip | |
pip install -U twine build | |
python -m build . | |
twine check dist/* | |
ls -lh dist | |
- name: write schema | |
run: | | |
pip install -e . check-jsonschema | |
python -m npe2.manifest.schema > schema.json | |
check-jsonschema --check-metaschema schema.json | |
- name: Build and publish | |
run: twine upload dist/* | |
env: | |
TWINE_USERNAME: __token__ | |
TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }} | |
- uses: softprops/action-gh-release@v2 | |
if: startsWith(github.ref, 'refs/tags/') | |
with: | |
generate_release_notes: true | |
files: schema.json |