Adding container test

.github/workflows/dockerhub.yml

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+name: CI to Dockerhub
+
+on:
+  push:
+    branches:
+      - 'main'
+
+jobs:
+  docker:
+    runs-on: ubuntu-latest
+    steps:
+      -
+        name: Checkout
+        uses: actions/checkout@v3
+      -
+        name: Set up QEMU
+        uses: docker/setup-qemu-action@v2
+      -
+        name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v2
+      -
+        name: Login to Docker Hub
+        uses: docker/login-action@v2
+        with:
+          username: ${{ secrets.DOCKERHUB_USERNAME }}
+          password: ${{ secrets.DOCKERHUB_TOKEN }}
+
+      - 
+        name: Lower github-runner storage
+        run: |
+          # Remove software and language runtimes we're not using
+          sudo rm -rf \
+            "$AGENT_TOOLSDIRECTORY" \
+            /opt/google/chrome \
+            /opt/microsoft/msedge \
+            /opt/microsoft/powershell \
+            /opt/pipx \
+            /usr/lib/mono \
+            /usr/local/julia* \
+            /usr/local/lib/android \
+            /usr/local/lib/node_modules \
+            /usr/local/share/chromium \
+            /usr/local/share/powershell \
+            /usr/share/dotnet \
+            /usr/share/swift
+          df -h /
+
+      -
+        name: Build and push
+        uses: docker/build-push-action@v4
+        with:
+          context: .
+          file: ./requirements/Dockerfile
+          push: true
+          tags: nasanccs/above-shrubs.pytorch:latest

requirements/Dockerfile

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+# Arguments to pass to the image
+ARG VERSION_DATE=24.01
+ARG FROM_IMAGE=nvcr.io/nvidia/pytorch
+
+# Import RAPIDS container as the BASE Image (cuda base image)
+FROM ${FROM_IMAGE}:${VERSION_DATE}-py3
+
+# Ubuntu needs noninteractive to be forced
+ENV DEBIAN_FRONTEND noninteractive
+ENV PROJ_LIB="/usr/share/proj"
+ENV CPLUS_INCLUDE_PATH="/usr/include/gdal"
+ENV C_INCLUDE_PATH="/usr/include/gdal"
+
+# System dependencies
+# System dependencies
+RUN apt-get update && \
+    apt-get -y install software-properties-common && \
+    add-apt-repository ppa:ubuntugis/ubuntugis-unstable && \
+    curl -s https://packagecloud.io/install/repositories/github/git-lfs/script.deb.sh | bash && \
+    apt-get update && apt-get -y dist-upgrade && \
+    apt-get -y install build-essential \
+        libsm6 \
+        libxext6 \
+        libxrender-dev \
+        libfontconfig1 \
+        bzip2 \
+        diffutils \
+        file \
+        build-essential \
+        make \
+        swig \
+        libnetcdf-dev \
+        libacl1-dev \
+        libgeos++-dev \
+        libgeos-dev \
+        libsqlite3-dev \
+        libx11-dev \
+        libproj-dev \
+        proj-data \
+        proj-bin \
+        libspatialindex-dev \
+        wget \
+        vim \
+        curl \
+        git \
+        procps \
+        gcc \
+        g++ \
+        bzip2 \
+        libssl-dev \
+        libzmq3-dev \
+        libpng-dev \
+        libfreetype6-dev \ 
+        locales \
+        git-lfs && \
+    apt-get -y install gdal-bin libgdal-dev && \
+    apt-get -y autoremove && \
+    rm -rf /var/cache/apt /var/lib/apt/lists/*
+
+# Install shiftc
+WORKDIR /app
+RUN git clone --single-branch --branch master https://github.com/pkolano/shift.git && \
+    cd shift/c && \
+    make nolustre && \
+    cd ../ && \
+    install -m 755 perl/shiftc /usr/local/bin/ && \
+    install -m 755 c/shift-bin /usr/local/bin/ && \
+    install -m 755 perl/shift-mgr /usr/local/bin/ && \
+    install -m 644 etc/shiftrc /etc/ && \
+    install -m 755 perl/shift-aux /usr/local/bin/ && \
+    install -m 755 c/shift-bin /usr/local/bin/ && \
+    export LC_ALL=en_US.UTF-8 && \
+    export LANG=en_US.UTF-8 && \
+    locale-gen en_US.UTF-8 && \
+    rm -rf /app
+
+# Pip
+RUN pip --no-cache-dir install omegaconf \
+    terratorch \
+    pytorch-lightning \
+    Lightning \
+    transformers \
+    datasets \
+    webdataset \
+    deepspeed \
+    'huggingface_hub[cli,torch]' \
+    torchgeo \
+    rasterio \
+    rioxarray \
+    xarray \
+    xarray-spatial \
+    geopandas \
+    opencv-python \
+    opencv-python-headless \
+    opencv-contrib-python \
+    opencv-contrib-python-headless \
+    tifffile \
+    webcolors \
+    Pillow \
+    seaborn \
+    xgboost \
+    tiler \
+    segmentation-models \
+    timm \
+    supervision \
+    pytest \
+    coveralls \
+    rtree \
+    sphinx \
+    sphinx_rtd_theme \
+    yacs \
+    termcolor \
+    segmentation-models-pytorch \
+    GDAL==`ogrinfo --version | grep -Eo '[0-9]\.[0-9]\.[0-9]+'`
+
+HEALTHCHECK NONE
+ENTRYPOINT []
+CMD ["/bin/bash"]