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neuroinformatics-unit · Feb 20, 2024 · 82b4d3b · 82b4d3b
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diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle
diff --git a/.doctrees/open_science/Data-sharing.doctree b/.doctrees/open_science/Data-sharing.doctree
diff --git a/_sources/open_science/Data-sharing.md.txt b/_sources/open_science/Data-sharing.md.txt
@@ -56,7 +56,7 @@ If you have any technical questions about sharing data or code, please contact a
 (repo-table)=
 ## Reference of potential repositories for neuroscience data
 | Repository                         | URL                                                 | Domain                                                                                                |
-| ---------------------------------- | --------------------------------------------------- | ----------------------------------------------------------------------------------------------------- |
+| ---------------------------------- |-----------------------------------------------------| ----------------------------------------------------------------------------------------------------- |
 | Globus                             |                                                     | Anything                                                                                              |
 | figshare                           | https://rdr.ucl.ac.uk/The_Sainsbury_Wellcome_Centre | Anything                                                                                              |
 | Zenodo                             | https://zenodo.org/                                 | Anything                                                                                              |
@@ -74,4 +74,4 @@ If you have any technical questions about sharing data or code, please contact a
 | BrainGlobe                         | https://gin.g-node.org/BrainGlobe/atlases           | Brain Atlases                                                                                         |
 | NeuroMorpho                        | https://neuromorpho.org/                            | Neuronal morphologies                                                                                 |
 | Cell Image Library                 | http://ccdb.ucsd.edu/home                           | Cell images                                                                                           |
-| ModelDB                            | https://senselab.med.yale.edu/ModelDB/              | Computational neuroscience models                                                                     |
+| ModelDB                            | https://modeldb.science/                            | Computational neuroscience models                                                                     |
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diff --git a/_static/vendor/fontawesome/6.1.2/LICENSE.txt → _static/vendor/fontawesome/6.5.1/LICENSE.txt b/_static/vendor/fontawesome/6.1.2/LICENSE.txt → _static/vendor/fontawesome/6.5.1/LICENSE.txt
@@ -23,7 +23,7 @@ as SVG and JS file types.
 In the Font Awesome Free download, the SIL OFL license applies to all icons
 packaged as web and desktop font files.
 
-Copyright (c) 2022 Fonticons, Inc. (https://fontawesome.com)
+Copyright (c) 2023 Fonticons, Inc. (https://fontawesome.com)
 with Reserved Font Name: "Font Awesome".
 
 This Font Software is licensed under the SIL Open Font License, Version 1.1.
@@ -123,7 +123,7 @@ OTHER DEALINGS IN THE FONT SOFTWARE.
 In the Font Awesome Free download, the MIT license applies to all non-font and
 non-icon files.
 
-Copyright 2022 Fonticons, Inc.
+Copyright 2023 Fonticons, Inc.
 
 Permission is hereby granted, free of charge, to any person obtaining a copy of
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- * Copyright 2022 Fonticons, Inc.
+ * Copyright 2023 Fonticons, Inc.
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diff --git a/data_analysis/HPC-module-SLEAP.html b/data_analysis/HPC-module-SLEAP.html
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+                <article class="bd-article">
 
   <section class="tex2jax_ignore mathjax_ignore" id="use-the-sleap-module-on-the-swc-hpc-cluster">
 <h1>Use the SLEAP module on the SWC HPC cluster<a class="headerlink" href="#use-the-sleap-module-on-the-swc-hpc-cluster" title="Link to this heading">#</a></h1>
@@ -1085,12 +1075,14 @@ <h3>Problems with the SLEAP module<a class="headerlink" href="#problems-with-the
 
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 <li class="toc-h2 nav-item toc-entry"><a class="reference internal nav-link" href="#abbreviations">Abbreviations</a></li>
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     <span class="fa-solid fa-bars"></span>
@@ -145,12 +144,6 @@
 
         <div class="navbar-item">
 <nav class="navbar-nav">
-  <p class="sidebar-header-items__title"
-     role="heading"
-     aria-level="1"
-     aria-label="Site Navigation">
-    Site Navigation
-  </p>
   <ul class="bd-navbar-elements navbar-nav">
 
                     <li class="nav-item current active">
@@ -246,11 +239,14 @@
 
 </div>
 
-    </nav>
+    </header>
 
+
   <div class="bd-container">
     <div class="bd-container__inner bd-page-width">
 
+
+
       <div class="bd-sidebar-primary bd-sidebar">
 
 
@@ -262,12 +258,6 @@
 
           <div class="navbar-item">
 <nav class="navbar-nav">
-  <p class="sidebar-header-items__title"
-     role="heading"
-     aria-level="1"
-     aria-label="Site Navigation">
-    Site Navigation
-  </p>
   <ul class="bd-navbar-elements navbar-nav">
 
                     <li class="nav-item current active">
@@ -390,7 +380,7 @@
 
 
 <div id="searchbox"></div>
-                <article class="bd-article" role="main">
+                <article class="bd-article">
 
   <section class="tex2jax_ignore mathjax_ignore" id="data-analysis">
 <h1>Data Analysis<a class="headerlink" href="#data-analysis" title="Link to this heading">#</a></h1>
@@ -437,6 +427,8 @@ <h1>Data Analysis<a class="headerlink" href="#data-analysis" title="Link to this
 
 
 
+                <div class="bd-sidebar-secondary bd-toc"></div>
+
 
           </div>
           <footer class="bd-footer-content">
@@ -448,8 +440,8 @@ <h1>Data Analysis<a class="headerlink" href="#data-analysis" title="Link to this
   </div>
 
   <!-- Scripts loaded after <body> so the DOM is not blocked -->
-  <script src="../_static/scripts/bootstrap.js?digest=5b4479735964841361fd"></script>
-<script src="../_static/scripts/pydata-sphinx-theme.js?digest=5b4479735964841361fd"></script>
+  <script src="../_static/scripts/bootstrap.js?digest=8d27b9dea8ad943066ae"></script>
+<script src="../_static/scripts/pydata-sphinx-theme.js?digest=8d27b9dea8ad943066ae"></script>
 
   <footer class="bd-footer">
 <div class="bd-footer__inner bd-page-width">
@@ -463,7 +455,7 @@ <h1>Data Analysis<a class="headerlink" href="#data-analysis" title="Link to this
 <p class="theme-version">
 Built with the
 <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a>
-0.14.4.
+0.15.2.
 </p></div>
 
     </div>