Add emerging subclades for H3N2 HA 2y public build

nextstrain · Sep 14, 2024 · 6856348 · 6856348
1 parent 17ea783
commit 6856348
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diff --git a/config/h3n2/ha/auspice_config.json b/config/h3n2/ha/auspice_config.json
@@ -75,6 +75,45 @@
         ]
       ]
     },
+    {
+      "key": "emerging_subclade",
+      "title": "Emerging subclade",
+      "type": "categorical",
+      "scale": [
+        [
+          "J",
+          "#4068CF"
+        ],
+        [
+          "J.1",
+          "#5098B9"
+        ],
+        [
+          "J.1.1",
+          "#6CB28C"
+        ],
+        [
+          "J.2",
+          "#94BD62"
+        ],
+        [
+          "J.2.1",
+          "#BFBB47"
+        ],
+        [
+          "J.2.2",
+          "#DFA53B"
+        ],
+        [
+          "J.3",
+          "#E67131"
+        ],
+        [
+          "J.4",
+          "#DB2823"
+        ]
+      ]
+    },
     {
       "key": "haplotype",
       "title": "Derived haplotype",

diff --git a/profiles/nextstrain-public.yaml b/profiles/nextstrain-public.yaml
@@ -205,6 +205,7 @@ array-builds:
       tree_exclude_sites: "config/{lineage}/{{segment}}/exclude-sites.txt"
       clades: "config/{lineage}/ha/clades.tsv"
       subclades: "config/{lineage}/{{segment}}/subclades.tsv"
+      emerging_subclades: "config/h3n2/{{segment}}/emerging_subclades.tsv"
       auspice_config: "config/{lineage}/{{segment}}/auspice_config.json"
       vaccines: "config/{lineage}/vaccine.json"
       enable_glycosylation: true