The format is based on Keep a Changelog and this project adheres to Semantic Versioning.
Initial release of nf-core/circrna, created with the nf-core template.
- Multiple methods for BSJ detection (CIRIquant, find_circ, segemehl, mapsplice, circexplorer2, circrna_finder, DCC)
- Multiple methods for circRNA quantification (psirc-quant, CIRIquant, sum and max aggregations)
- DB and GTF-based circRNA annotation
- MiRNA target prediction (TargetScan, miRanda) and correlation analysis
- Basic statistical analyses (CircTest, CIRIquant differential expression)