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Is the default binsize really 1 when using `CPM` normalization? #256

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nvictus opened this issue Aug 31, 2024 · 1 comment

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bug

nvictus commented Aug 31, 2024

Description of the bug

Possible discrepancy with what the docs say in the table and the code, where the default value appears to be 50:

cutandrun/nextflow.config

Line 66 in 6e1125d

normalisation_binsize = 50

Command used and terminal output

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nvictus added the bug label

Contributor

chris-cheshire commented Sep 12, 2024

Thanks for the catch, i seem to have forgotten to update

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