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1.0.0 - German Rollmops - 2023-02-15
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@jasmezz jasmezz released this 15 Feb 11:41
· 727 commits to master since this release
1.0.0
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v1.0.0 - German Rollmops - [2023-02-15]

Initial release of nf-core/funcscan, created with the nf-core template.

Added

  • Added annotation tools (Prokka, Prodigal, Bakta).
  • Added AMP screening workflow (tools: Macrel, AMPlify, ampir, hmmsearch).
  • Added ARG screening workflow (tools: ABRicate, AMRFinderPlus, DeepARG, fARGene).
  • Added BGC screening workflow (tools: antiSMASH, DeepBGC, GECCO, hmmsearch).
  • Added workflow summary tools (tools: hAMRonization, AMPcombi, comBGC).

Fixed

Dependencies

Deprecated

Photo by Ra Boe under CC BY-SA 2.5

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