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1.1.4 - British Beans on Toast (Patch) - 2023-11-07
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@jasmezz jasmezz released this 07 Nov 14:10
· 439 commits to master since this release
1.1.4
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Learn about vigilant mode.

v1.1.4 - [2023-11-07]

Added

Fixed

  • #306 Added new parameter annotation_prokka_retaincontigheaders to allow prokka to retain the original contig headers/locus tag. (by @Darcy220606)
  • #307 Fixed stability of deepARG tests by using Zenodo copy of database (❤️ to Gustavo Arango and Liqing Zhang for uploading, fix by @jfy133)
  • #310 Fixed error when supplying uncompressed input; added "fas" file extension for FASTA files. (by @tavareshugo)
  • #311 Merged pipeline template of nf-core/tools version 2.10. (by @jasmezz)

Dependencies

Tool Previous version New version
AMRFinderPlus 3.10.42 3.11.18
Bakta 1.7.0 1.8.2
MultiQC 1.14 1.15

Deprecated

  • FastQC

Contributors

tavareshugo, jfy133, and 2 other contributors
Assets 2
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