auto_create_purls.yml

name: auto_create_purls

on:
  schedule:
    - cron: '1 0 * * 6'
  workflow_dispatch:

jobs:
  extract_terms_without_purls:
    runs-on: ubuntu-latest

    steps:
      - name: Checkout repository
        uses: actions/checkout@v4

      - name: setup python
        uses: actions/setup-python@v5
        with:
          python-version: '3.10'

      - name: remove previous chrome
        run: sudo apt purge google-chrome-stable

      - name: install requests
        run: |
          pip install chromedriver-autoinstaller
          pip install pyvirtualdisplay
          pip install requests
          pip install selenium

      - name: Install xvfb
        run: sudo apt-get install xvfb

      - name: extract all dpbo terms
        run: |
          grep -E 'id: DPBO:[0-9]+' dpbo.obo > missing_purls.txt

      - name: extract TANs and replace colon
        run: |
          sed -i 's/id: DPBO:\([0-9]\+\)/DPBO_\1/g' missing_purls.txt 

      - name: run purl verification script
        run: python .github/workflows/verify_purls.py

      - name: run purl creation
        env:
          MY_MAIL: ${{ secrets.PURL_USERNAME }}
          MY_PW: ${{ secrets.PURL_PASSWORD }}
        run: python .github/workflows/create_purls.py

      - name: remove temporary new files
        run: |
          rm missing_purls.txt

      - name: commit and push
        uses: mikeal/publish-to-github-action@master
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
          BRANCH_NAME: 'main'