Motifs and Motivations

With this release we finally add the 3-nodes motifs. This means users will be able to:

• count 3-nodes motifs on their networks
• compute analytical expectation, standard deviation and z-score of the 3-motifs numerosity on a with respect to the null model provided by the solution of the dcm maximum entropy model computed by NEMtropy.
• updated naming convention for 2-motifs and 3-motifs

You can find more information about the new functions in this notebook

Dyadic motifs now available!

With this release, we add functions to compute the dyadic motifs in a graph.

Corrections for BipartiteGraph

BipartiteGraph was buggy when having to return the bipartite projection in various formats and when computing its likelihood.

Some minor fixes.

Minor changes:

• Seed in ensemble sampler is not fixed anymore;
• New functions "model_loglikelihood" returning the loglikelihood of the last run model computed in the solution;

Less buggy than ever!

It works without having to imagine things such as the name of the methods or having to set an initial guess even if it's optional!

Bugs, bugs and bugs.

The following bugs are fixed with this release:
- Initialise directed and undirected graph from edgelist with strings as a node label was not working;
- build_adjancy_from_edgelist function was raising a compilation error with some versions of Numba.

Requirementes, requirements, requirements...

Shame on us, we were so excited with yesterday new release, that we forgot some minor particulars...
Nothing to worry about! Everything is fixed now and ready to go.

BiCM: bipartite networks join the party

In this release a whole new typology of graphs is added: bipartite networks.
Thanks to Matteo, who just joined the team, his python package BiCM was fully integrated in NEMtropy.

For a full tutorial on the new suite of methods on bipartite networks please visit the tutorial.

See you soon space networks cowboys

numba.core dependency fixed

v1.0.6

Merge branch 'master' of https://github.com/nicoloval/NEMtropy

Bugs Fixing

1.0.5

fixed bugs