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TEST: Add sloppy MSM configuration for use in debugging/CI #366

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merged 3 commits into from
Sep 6, 2023

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effigies
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@effigies effigies commented Sep 6, 2023

MSM is taking ~30min to run on fMRIPrep CI. This adds a sloppy configuration that will hopefully reduce that dramatically.

@effigies effigies changed the title TEST: Add sloppy TEST: Add sloppy MSM configuration for use in debugging/CI Sep 6, 2023
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codecov bot commented Sep 6, 2023

Codecov Report

Patch coverage: 40.00% and project coverage change: -11.12% ⚠️

Comparison is base (37ad1c6) 54.65% compared to head (4e6fdd3) 43.54%.

Additional details and impacted files
@@             Coverage Diff             @@
##           master     #366       +/-   ##
===========================================
- Coverage   54.65%   43.54%   -11.12%     
===========================================
  Files          23       23               
  Lines        1588     1589        +1     
  Branches      212      208        -4     
===========================================
- Hits          868      692      -176     
- Misses        664      842      +178     
+ Partials       56       55        -1     
Flag Coverage Δ
ds005 ?
ds054 43.54% <40.00%> (-0.03%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Changed Coverage Δ
smriprep/workflows/anatomical.py 45.56% <0.00%> (ø)
smriprep/workflows/surfaces.py 11.51% <50.00%> (-0.07%) ⬇️

... and 10 files with indirect coverage changes

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effigies commented Sep 6, 2023

230906-17:55:17,627 nipype.workflow INFO:
         [Node] Finished "_msmsulc1", elapsed time 164.174763s.
230906-17:55:49,585 nipype.workflow INFO:
         [Node] Finished "_msmsulc0", elapsed time 196.20051s.

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@mgxd mgxd left a comment

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sweet!

@mgxd mgxd merged commit b8a1949 into nipreps:master Sep 6, 2023
10 of 12 checks passed
@effigies effigies deleted the test/msm-sloppy branch September 6, 2023 18:28
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2 participants