properly remove GE multiecho bvals/bvecs

[bpinsard]

GE Hyperband (at least some versions of it) multi-echo data get diffusion vector/values in the dicom tags used by dcm2niix to generate bvecs/bvals.

While heudiconv is properly coded to remove such data when there is a single bvec/bval per series, multi-echo data outputs as many as there are echoes causing it to crash.

An error occur processing s398
expected str, bytes or os.PathLike object, not TraitListObject
Traceback (most recent call last):
  File "/app/convert.py", line 54, in convert_pipeline
    heudiconv_workflow(**heudiconv_params)
  File "/usr/local/lib/python3.9/dist-packages/heudiconv/main.py", line 463, in workflow
    prep_conversion(
  File "/usr/local/lib/python3.9/dist-packages/heudiconv/convert.py", line 258, in prep_conversion
    convert(
  File "/usr/local/lib/python3.9/dist-packages/heudiconv/convert.py", line 623, in convert
    bids_outfiles = save_converted_files(
  File "/usr/local/lib/python3.9/dist-packages/heudiconv/convert.py", line 891, in save_converted_files
    if bvals_are_zero(res.outputs.bvals):
  File "/usr/local/lib/python3.9/dist-packages/heudiconv/convert.py", line 1083, in bvals_are_zero
    with open(bval_file) as f:
TypeError: expected str, bytes or os.PathLike object, not TraitListObject

The current PR fixes that by checking if all files only contain zeros bvals when not suffixed _dwi, and remove all of them appropriately.

FYI @miltoncamachocamacho

[codecov]

Codecov Report

Attention: 4 lines in your changes are missing coverage. Please review.

Comparison is base (1d614cd) 81.97% compared to head (bc4ce42) 82.00%.
Report is 7 commits behind head on master.

Files	Patch %	Lines
heudiconv/convert.py	75.00%	4 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##           master     #728      +/-   ##
==========================================
+ Coverage   81.97%   82.00%   +0.03%     
==========================================
  Files          41       41              
  Lines        4149     4163      +14     
==========================================
+ Hits         3401     3414      +13     
- Misses        748      749       +1     

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[github-actions]

🚀 PR was released in v1.0.2 🚀