RxODE and nlmixr is not getting installed on R version 4 even after installing miniconda (python and other dependencies)

[sujit541]

RxODE and nlmixr is not getting installed on R version 4 even after installing miniconda (python and other dependencies)

I went through previous issues related to this installation problem. But nothing turned out useful. Please help me to sort out the issue. I uninstalled R and reinstalled it, even did not worked.

sessionInfo()
R version 4.0.4 (2021-02-15)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C LC_TIME=English_United States.1252

attached base packages:
[1] stats graphics grDevices utils datasets methods base

loaded via a namespace (and not attached):
[1] assertthat_0.2.1 rlang_0.4.10 cli_2.3.0 remotes_2.2.0 ellipsis_0.3.1 tools_4.0.4
[7] glue_1.4.2 tinytex_0.29 xfun_0.21 compiler_4.0.4

[sujit541]

Installed packages information if it is required

check installed packages

installed.packages()
Package LibPath Version Priority
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DBI NA
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DT NA
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haven NA
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[ reached getOption("max.print") -- omitted 121 rows ]

[mattfidler]

You can try the installer, it has everything setup and requires no playing with with anaconda/R interaction.

https://github.com/nlmixrdevelopment/nlmixr/releases/tag/v1.1.1-3

If you wish to use the development version you can use:

remotes::install_github("nlmixrdevelopment/RxODE")
remotes::install_github("nlmixrdevelopment/nlmixr")

The development version does not require python at all.

[sujit541]

I tried this way but it didn't work. Then I reinstalled everything about R studio and base R. I don’t know how to fix it. Every time it shows error

…

On Sat, Feb 20, 2021 at 8:48 PM Matthew Fidler ***@***.***> wrote: You can try the installer, it has everything setup and requires no playing with with anaconda/R interaction. https://github.com/nlmixrdevelopment/nlmixr/releases/tag/v1.1.1-3 If you wish to use the development version you can use: remotes::install_github("nlmixrdevelopment/RxODE") remotes::install_github("nlmixrdevelopment/nlmixr") The development version does not require python at all. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#382 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AS5A4264WXHGOTNKHTR72XLTABX7LANCNFSM4X6QFRYQ> .

[mattfidler]

Did you look at the attached readme? It solves common problems in R/Rstudio. It also talks about how to have Rstudio use the nlmixr R.

[sujit541]

Thanks, I'll check it out.

…

On Sat, Feb 20, 2021 at 9:12 PM Matthew Fidler ***@***.***> wrote: Did you look at the attached readme? It solves common problems in R/Rstudio. It also talks about how to have Rstudio use the nlmixr R. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#382 (reply in thread)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AS5A422YNQMMSY3LCUHP7EDTAB2Z5ANCNFSM4X6QFRYQ> .

[sujit541]

Thanks, I'll check it out. By the way, I did not see any attachment except pasted link, if I am not mistaken. I read out that link though.

…

On Sat, Feb 20, 2021 at 9:12 PM Matthew Fidler ***@***.***> wrote: Did you look at the attached readme? It solves common problems in R/Rstudio. It also talks about how to have Rstudio use the nlmixr R. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#382 (reply in thread)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AS5A422YNQMMSY3LCUHP7EDTAB2Z5ANCNFSM4X6QFRYQ> .

[mattfidler]

The link has the installer; The direct link to the installer is here:

https://github.com/nlmixrdevelopment/nlmixr/releases/download/v1.1.1-3/nlmixr_1.1.1-3_x86_64_install.exe

[sujit541]

Thanks, I'll check it out.

…

On Sat, Feb 20, 2021 at 11:13 PM Matthew Fidler ***@***.***> wrote: The link has the installer; The direct link to the installer is here: https://github.com/nlmixrdevelopment/nlmixr/releases/download/v1.1.1-3/nlmixr_1.1.1-3_x86_64_install.exe — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#382 (reply in thread)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AS5A42YR4G2BIKL3NOQW5ODTACI7XANCNFSM4X6QFRYQ> .

[sujit541]

It worked finally with this development version. Thanks a lot for the

…

On Sun, Feb 21, 2021 at 2:03 AM Sujit Biswas ***@***.***> wrote: Thanks, I'll check it out. On Sat, Feb 20, 2021 at 11:13 PM Matthew Fidler ***@***.***> wrote: > The link has the installer; The direct link to the installer is here: > > > https://github.com/nlmixrdevelopment/nlmixr/releases/download/v1.1.1-3/nlmixr_1.1.1-3_x86_64_install.exe > > — > You are receiving this because you authored the thread. > Reply to this email directly, view it on GitHub > <#382 (reply in thread)>, > or unsubscribe > <https://github.com/notifications/unsubscribe-auth/AS5A42YR4G2BIKL3NOQW5ODTACI7XANCNFSM4X6QFRYQ> > . >

[ibmhassan2]

How you installed Rxode library ? I tried many ways but I could not?, could you please help?

[mattfidler]

Great. I'm glad it worked👍

[ibmhassan2]

How you installed Rxode library ? I tried many ways but I could not?, could you please help?,
I tried the following methods but still not working:

remotes::install_github("nlmixrdevelopment/RxODE")
remotes::install_github("nlmixrdevelopment/nlmixr")

[mattfidler]

Try installing rxode2/nlmixr2. At this time RxODE is removed from CRAN and rxode2 and nlmixr2 is still on CRAN and is actively maintained.