Dockerfile

# (C) Copyright 2017 o2r project. https://o2r.info
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
FROM python:3.9.6-buster

## based on https://github.com/rocker-org/rocker/blob/master/r-base/Dockerfile, but use simply the available R version
RUN apt-get update \
	&& apt-get install -y --no-install-recommends \
		r-base \
		#r-base-dev \
		#r-recommended \
  && echo 'options(repos = c(CRAN = "https://cran.rstudio.com/"), download.file.method = "libcurl")' >> /etc/R/Rprofile.site \
    ##&& echo 'source("/etc/R/Rprofile.site")' >> /etc/littler.r \
	&& rm -rf /tmp/downloaded_packages/ /tmp/*.rds \
	&& rm -rf /var/lib/apt/lists/*

WORKDIR /o2r-meta
COPY requirements.txt requirements.txt
RUN pip install -r requirements.txt

# Install potentially failing dependencies, but do not fail build if optional requirements are missing
RUN apt-get update \
  && apt-get install -y --no-install-recommends \
    libgdal-dev
COPY requirements-opt.txt requirements-opt.txt
#RUN pip install -r requirements-opt.txt; exit 0
RUN pip install -r requirements-opt.txt 2>&1 > /tmp/o2r-meta-optional.log \
  || echo "\n\nErrors installing optional dependencies\n\n" && cat /tmp/o2r-meta-optional.log

COPY broker broker
COPY extract extract
COPY harvest harvest
COPY helpers helpers
COPY parsers parsers
COPY schema schema
COPY validate validate
COPY o2rmeta.py o2rmeta.py

# Metadata params provided with docker build command
ARG VERSION=dev
ARG VCS_URL
ARG VCS_REF
ARG BUILD_DATE

# Metadata http://label-schema.org/rc1/
LABEL maintainer="o2r-project <https://o2r.info>" \
  org.label-schema.vendor="o2r project" \
  org.label-schema.url="https://o2r.info" \
  org.label-schema.name="o2r meta" \
  org.label-schema.description="Metadata toolsuite for an extract-map-validate workflow supporting ERC" \    
  org.label-schema.version=$VERSION \
  org.label-schema.vcs-url=$VCS_URL \
  org.label-schema.vcs-ref=$VCS_REF \
  org.label-schema.build-date=$BUILD_DATE \
  org.label-schema.docker.schema-version="rc1"

RUN useradd o2r
USER o2r

SHELL ["sh", "-lc"]

ENTRYPOINT ["python3", "/o2r-meta/o2rmeta.py"]