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value-specifications.owl
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value-specifications.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/obi/dev/modules/value-specifications.owl#"
xml:base="http://purl.obolibrary.org/obo/obi/dev/modules/value-specifications.owl"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/obi/dev/modules/value-specifications.owl"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000234 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000234"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/IAO_0000030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000030"/>
<!-- http://purl.obolibrary.org/obo/OBI_0000011 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000011"/>
<!-- http://purl.obolibrary.org/obo/OBI_0001930 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0001930"/>
<!-- http://purl.obolibrary.org/obo/OBI_0001931 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0001931"/>
<!-- http://purl.obolibrary.org/obo/OBI_0002199 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002199">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<obo:IAO_0000112>cannot be assessed, not applicable, unknown</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">An information content entity that provides an explanation why a data item is not provided.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>reason for lack of data item</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002200 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002200">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002199"/>
<obo:IAO_0000115 xml:lang="en">A reason for lack of data item that is the negative output of a determination if assay will provide reliable results.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>cannot be assessed</obo:IAO_0000118>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>cannot be assessed determination</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002201 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002201">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
<obo:IAO_0000115 xml:lang="en">A planned process that is used to assess whether an assay will provide reliable results based on the conditions or qualities of the inputs, devices, and other participants of the assay.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>determination if assay will provide reliable results</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002202 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002202">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002200"/>
<obo:IAO_0000112>AJCC 7th edition GX: cannot be assessed.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A cannot be assessed determination for histologic tumor grade.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>GX</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002203 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002203">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002200"/>
<obo:IAO_0000112>AJCC 7th edition pTX: cannot be assessed.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A cannot be assessed determination for pathologic primary tumor staging.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pTX</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002204 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002204">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002200"/>
<obo:IAO_0000112>AJCC 7th edition pNX: cannot be assessed.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A cannot be assessed determination of pathologic staging of lymph nodes.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pNX</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002205 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002205">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000112>G1:Well differentiated</obo:IAO_0000112>
<obo:IAO_0000112>G4: Undifferentiated</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a histologic grade assigned to a tumor slide specimen according to the American Joint Committee on Cancer (AJCC) 7th Edition grading system.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>histologic grade according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002210 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002210">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a histologic grade assigned to a tumor slide specimen according to the Fuhrman Nuclear Grading System.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Histologic Grade (Fuhrman Nuclear Grading System)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>histologic grade according to the Fuhrman Nuclear Grading System</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002215 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002215">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a histologic grade assigned to a ovarian tumor.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>histologic grade for ovarian tumor</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002216 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002216">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002215"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor that is from a two-tier histological classification of tumors.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>histologic grade for ovarian tumor according to a two-tier grading system</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002219 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002219">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002215"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor that is from a histological classification by the World Health Organization (WHO).</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>histologic grade for ovarian tumor according to the World Health Organization</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002224 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002224">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of colorectal cancer following the rules of the TNM American Joint Committee on Cancer (AJCC) version 7 classification system as they pertain to staging of the primary tumor. TNM pathologic primary tumor findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pT: Pathologic spread colorectal primary tumor (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic primary tumor stage for colon and rectum according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002232 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002232">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of lung cancer following the rules of the TNM American Joint Committee on Cancer (AJCC) version 7 classification system as they pertain to staging of the primary tumor. TNM pathologic primary tumor findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pT: Pathologic spread lung primary tumor (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic primary tumor stage for lung according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002243 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002243">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of renal cancer following the rules of the TNM AJCC v7 classification system as they pertain to staging of the primary tumor. TNM pathologic primary tumor findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pT: Pathologic spread kidney primary tumor (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic primary tumor stage for kidney according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002256 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002256">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of ovarian cancer following the rules of the TNM AJCC v7 classification system as they pertain to staging of the primary tumor. TNM pathologic primary tumor findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pT: Pathologic spread ovarian primary tumor (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic primary tumor stage for ovary according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002270 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002270">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of colorectal cancer following the rules of the TNM AJCC v7 classification system as they pertain to staging of regional lymph nodes.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pN: Pathologic spread colon lymph nodes (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic lymph node stage for colon and rectum according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002279 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002279">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of lung cancer following the rules of the TNM AJCC v7 classification system as they pertain to staging of regional lymph nodes.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pN: Pathologic spread colon lymph nodes (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic lymph node stage for lung according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002284 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002284">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of renal cancer following the rules of the TNM AJCC v7 classification system as they pertain to staging of regional lymph nodes.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pN: Pathologic spread kidney lymph nodes (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic lymph node stage for kidney according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002287 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002287">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of ovarian cancer following the rules of the TNM AJCC v7 classification system as they pertain to staging of regional lymph nodes.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>pN: Pathologic spread ovarian lymph nodes (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic lymph node stage for ovary according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002290 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002290">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of colon cancer following the rules of the TNM AJCC v7 classification system as they pertain to distant metastases. TNM pathologic distant metastasis findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>M: colon distant metastases (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic distant metastases stage for colon according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002298 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002298">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of lung cancer following the rules of the TNM AJCC v7 classification system as they pertain to distant metastases. TNM pathologic distant metastasis findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>M: lung distant metastases (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic distant metastases stage for lung according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002306 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002306">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of renal cancer following the rules of the TNM AJCC v7 classification system as they pertain to distant metastases. TNM pathologic distant metastasis findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>M: kidney distant Metastases (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic distant metastases stage for kidney according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002310 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002310">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of ovarian cancer following the rules of the TNM AJCC v7 classification system as they pertain to distant metastases. TNM pathologic distant metastasis findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>M: ovarian distant metastases (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pathologic distant metastases stage for ovary according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002314 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002314">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is an assessment of the stage of a cancer according to the American Joint Committee on Cancer (AJCC) v7 staging systems.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Clinical tumor stage group (AJCC 7th Edition)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>clinical tumor stage group according to AJCC 7th edition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002326 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002326">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is an assessment of the stage of a gynecologic cancer according to the International Federation of Gynecology and Obstetrics (FIGO) staging systems.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Clinical FIGO stage</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>International Federation of Gynecology and Obstetrics cervical cancer stage value specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002341 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002341">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is a pathologic finding about one or more characteristics of ovarian cancer following the rules of the FIGO classification system.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Pathologic Tumor Stage Grouping for ovarian cancer (FIGO)</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>International Federation of Gynecology and Obstetrics ovarian cancer stage value specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002356 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002356">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that is an assessment of a participant's performance status (general well-being and activities of daily life).</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Performance Status Scale</obo:IAO_0000118>
<obo:IAO_0000119>https://en.wikipedia.org/wiki/Performance_status</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>performance status value specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002357 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002357">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002356"/>
<obo:IAO_0000115 xml:lang="en">A performance status value specification designed by the Eastern Cooperative Oncology Group to assess disease progression and its affect on the daily living abilities of the patient.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>ECOG score</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>Eastern Cooperative Oncology Group score value specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002363 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002363">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0002356"/>
<obo:IAO_0000115 xml:lang="en">A performance status value specification designed for classifying patients 16 years of age or older by their functional impairment.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Karnofsky Score</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>Karnofsky score vaue specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002490 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002490">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001931"/>
<obo:IAO_0000115 xml:lang="en">A scalar value specification that specifies the point in time that a human participant under investigation self-administers a medication material</obo:IAO_0000115>
<obo:IAO_0000117>John Judkins</obo:IAO_0000117>
<obo:IAO_0000118>medication timepoint</obo:IAO_0000118>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>VEuPathDB</obo:IAO_0000234>
<rdfs:label>medication time value specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0002491 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002491">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001931"/>
<obo:IAO_0000115 xml:lang="en">A scalar value specification that specifies the value of the quantity of a material entity administered to an organism as a treatment</obo:IAO_0000115>
<obo:IAO_0000117>John Judkins</obo:IAO_0000117>
<obo:IAO_0000118>medication dose</obo:IAO_0000118>
<obo:IAO_0000119>OBI</obo:IAO_0000119>
<obo:IAO_0000234>VEuPathDB</obo:IAO_0000234>
<rdfs:label>medication dose value specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0003600 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0003600">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0001930"/>
<obo:IAO_0000111>hypertension grade</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">A categorical value specification that indicates the severity of hypertension.</obo:IAO_0000115>
<obo:IAO_0000117>Bjoern Peters</obo:IAO_0000117>
<obo:IAO_0000117>Randi Vita</obo:IAO_0000117>
<obo:IAO_0000117>Sebastian Duesing</obo:IAO_0000117>
<rdfs:label>hypertension grade</rdfs:label>
</owl:Class>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Individuals
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/OBI_0002206 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002206">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002205"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to AJCC 7th edition indicating that the tumor cells and the organization of the tumor tissue appear close to normal.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G1</obo:IAO_0000118>
<obo:IAO_0000119>https://www.cancer.gov/about-cancer/diagnosis-staging/prognosis/tumor-grade-fact-sheet</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G1: Well differentiated</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002207 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002207">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002205"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to AJCC 7th edition indicating that the tumor cells are moderately differentiated and reflect an intermediate grade.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G2</obo:IAO_0000118>
<obo:IAO_0000119>https://www.cancer.gov/about-cancer/diagnosis-staging/prognosis/tumor-grade-fact-sheet</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G2: Moderately differentiated</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002208 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002208">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002205"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to AJCC 7th edition indicating that the tumor cells are poorly differentiated and do not look like normal cells and tissue.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G3</obo:IAO_0000118>
<obo:IAO_0000119>https://www.cancer.gov/about-cancer/diagnosis-staging/prognosis/tumor-grade-fact-sheet</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G3: Poorly differentiated</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002209 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002209">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002205"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to AJCC 7th edition indicating that the tumor cells are undifferentiated and do not look like normal cells and tissue.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G4</obo:IAO_0000118>
<obo:IAO_0000119>https://www.cancer.gov/about-cancer/diagnosis-staging/prognosis/tumor-grade-fact-sheet</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G4: Undifferentiated</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002211 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002211">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002210"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to the Fuhrman Nuclear Grading System indicating that nuclei are round, uniform, approximately 10um and that nucleoli are inconspicuous or absent.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Grade 1</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G1 (Fuhrman)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002212 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002212">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002210"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to the Fuhrman Nuclear Grading System indicating that nuclei are slightly irregular, approximately 15um and nucleoli are evident.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Grade 2</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G2 (Fuhrman)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002213 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002213">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002210"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to the Fuhrman Nuclear Grading System indicating that nuclei are very irregular, approximately 20um and nucleoli large and prominent.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Grade 3</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G3 (Fuhrman)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002214 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002214">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002210"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade according to the Fuhrman Nuclear Grading System indicating that nuclei arei bizarre and multilobulated, 20um or greater and nucleoli are prominent and chromatin clumped.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Grade 4</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G4 (Fuhrman)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002217 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002217">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002216"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor according to a two-tier grading system indicating that the tumor is low grade.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>Low grade</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>Low grade ovarian tumor</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002218 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002218">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002216"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor according to a two-tier grading system indicating that the tumor is high grade.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>High grade</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>High grade ovarian tumor</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002220 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002220">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002219"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor according to the World Health Organization indicating that the tumor is well differentiated.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G1</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G1 (WHO)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002221 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002221">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002219"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor according to the World Health Organization indicating that the tumor is moderately differentiated.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G2</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G2 (WHO)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002222 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002222">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002219"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor according to the World Health Organization indicating that the tumor is poorly differentiated.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G3</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G3 (WHO)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002223 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002223">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002219"/>
<obo:IAO_0000115 xml:lang="en">A histologic grade for ovarian tumor according to the World Health Organization indicating that the tumor is undifferentiated.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000118>G4</obo:IAO_0000118>
<obo:IAO_0000119>NCI BBRB, OBI</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>G4 (WHO)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002225 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002225">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating that there is no evidence of primary tumor.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT0 (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002226 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002226">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating carcinoma in situ (intraepithelial or invasion of lamina propria).</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pTis (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002227 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002227">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating that the tumor invades submucosa.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT1 (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002228 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002228">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating that the tumor invades muscularis propria.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT2 (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002229 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002229">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating that the tumor invades subserosa or into non-peritionealized pericolic or perirectal tissues.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT3 (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002230 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002230">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating that the tumor perforates visceral peritoneum.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT4a (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002231 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002231">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002224"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for colon and rectum according to AJCC 7th edition indicating that the tumor directly invades other organs or structures.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/colon/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT4b (colon)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002233 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002233">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that there is no evidence of primary tumor.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT0 (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002234 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002234">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating carcinoma in situ.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pTis (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002235 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002235">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is 3 cm or less in greatest dimension, surrounded by lung or visceral pleura without bronchoscopic evidence of invasion more proximal than the lobar bronchus (i.e., not in the main bronchus).</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT1 (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002236 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002236">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is 2 cm or less in greatest dimension.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT1a (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002237 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002237">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is more than 2 cm but not more than 3 cm in greatest dimension.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT1b (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002238 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002238">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is more than 3 cm but not more than 7 cm or the tumor has any of the following features: involves main bronchus, 2 cm or more distal to the carina, invades visceral pleura, associated with atelectasis or obstructive pneumonitis that extends to the hilar region but does not involve the entire lung.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT2 (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002239 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002239">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is more than 3 cm but not more than 5 cm in greatest dimension.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT2a (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002240 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002240">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is more than 5 cm but not more than 7 cm in greatest dimension.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT2b (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002241 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002241">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor is more than 7 cm or one that directly invades any of: parietal pleura, chest wall (including superior sulcus tumors), diaphragm, phrenic nerve, mediastinal pleura, parietal pericardiu or the tumor is in the main bronchus less than 2 cm distal to the carina but without involvement of the carina or there is associated atelectasis or obstructive pneumonitis of the entire lung or there is separate tumor nodule(s) in the same lobe as the primary.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT3 (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002242 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002242">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002232"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for lung according to AJCC 7th edition indicating that the tumor of any size that invades any of the following: mediastinum, heart, great vessels, trachea, recurrent laryngeal nerve, esophagus, vertebral body, carina or there is separate tumor nodule(s) in a different ipsilateral lobe to that of the primary.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/lung/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT4 (lung)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002244 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002244">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002243"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for kidney according to AJCC 7th edition indicating that there is no evidence of primary tumor.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/kidney_parenchyma/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT0 (kidney)</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/OBI_0002245 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/OBI_0002245">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/OBI_0002243"/>
<obo:IAO_0000115 xml:lang="en">A pathologic primary tumor stage for kidney according to AJCC 7th edition indicating that the tumor is 7 cm or less in greatest dimension and limited to the kidney.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Stoeckert, Helena Ellis</obo:IAO_0000117>
<obo:IAO_0000119>https://staging.seer.cancer.gov/tnm/input/1.0/kidney_parenchyma/path_t/</obo:IAO_0000119>
<obo:IAO_0000234>NCI BBRB</obo:IAO_0000234>
<rdfs:label>pT1 (kidney)</rdfs:label>
</owl:NamedIndividual>