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Merge pull request #1566 from obi-ontology/fix-sputum
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Fix typo 'A induced sputum...' in three definitions
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@jamesaoverton
jamesaoverton authored Jul 11, 2022
2 parents 92081be + 341c977 commit c90a8d1
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6 changes: 3 additions & 3 deletions src/ontology/modules/specimen-assay-data.owl
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<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_2"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen.</obo:IAO_0000115>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Judkins</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">VEuPathDB</obo:IAO_0000119>
<obo:IAO_0000233 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://github.com/obi-ontology/obi/issues/1428</obo:IAO_0000233>
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<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_2759"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen.</obo:IAO_0000115>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Judkins</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">VEuPathDB</obo:IAO_0000119>
<obo:IAO_0000233 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://github.com/obi-ontology/obi/issues/1428</obo:IAO_0000233>
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<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen.</obo:IAO_0000115>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Judkins</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">VEuPathDB</obo:IAO_0000119>
<obo:IAO_0000233 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://github.com/obi-ontology/obi/issues/1428</obo:IAO_0000233>
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8 changes: 4 additions & 4 deletions src/ontology/templates/specimen-assay-data.tsv
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Expand Up @@ -24,9 +24,9 @@ OBI:0003264 bacteria in feces datum A feces microbiology datum that is interp
OBI:0003265 eukaryota in feces datum A feces microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass feces microbiology datum Eukaryota
OBI:0003266 virus in feces datum A feces microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass feces microbiology datum Viruses
OBI:0003267 eukaryota in urine datum A urine microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass urine microbiology datum Eukaryota
OBI:0003268 bacteria in induced sputum datum A induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Bacteria
OBI:0003269 eukaryota in induced sputum datum A induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Eukaryota
OBI:0003270 virus in induced sputum datum A induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Viruses
OBI:0003268 bacteria in induced sputum datum An induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Bacteria
OBI:0003269 eukaryota in induced sputum datum An induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Eukaryota
OBI:0003270 virus in induced sputum datum An induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Viruses
OBI:0003271 bacteria in endotracheal tube aspirate datum An endotracheal tube aspirate microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass endotracheal tube aspirate microbiology datum Bacteria
OBI:0003272 bacteria in lung datum A lung microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass lung microbiology datum Bacteria
OBI:0003273 eukaryota in lung datum A lung microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass lung microbiology datum Eukaryota
Expand All @@ -40,4 +40,4 @@ OBI:0003280 virus in pleural fluid datum A pleural fluid microbiology datum t
OBI:0003281 eukaryota in umbilical cord blood datum An umbilical cord blood microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass umbilical cord blood microbiology datum Eukaryota
OBI:0003365 milk assay datum A data item that is the specified output of a milk assay. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1515 subclass data item milk assay
OBI:0003382 placental blood microbiology datum An organism identification assay that is the specified output of a placental blood microbiology assay. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1297 subclass organism identification datum placental blood microbiology assay
OBI:0003383 eukaryota in placental blood datum A placental blood microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1297 subclass placental blood microbiology datum Eukaryota
OBI:0003383 eukaryota in placental blood datum A placental blood microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1297 subclass placental blood microbiology datum Eukaryota

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