From 341c9773f9572dd804fddcf0dbaa7c821ad239e0 Mon Sep 17 00:00:00 2001 From: "James A. Overton" Date: Mon, 11 Jul 2022 12:54:58 -0400 Subject: [PATCH] Fix typo 'A induced sputum...' in three definitions --- src/ontology/modules/specimen-assay-data.owl | 6 +++--- src/ontology/templates/specimen-assay-data.tsv | 8 ++++---- 2 files changed, 7 insertions(+), 7 deletions(-) diff --git a/src/ontology/modules/specimen-assay-data.owl b/src/ontology/modules/specimen-assay-data.owl index d7d33341..b50e6b99 100644 --- a/src/ontology/modules/specimen-assay-data.owl +++ b/src/ontology/modules/specimen-assay-data.owl @@ -654,7 +654,7 @@ - A induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. + An induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. John Judkins VEuPathDB https://github.com/obi-ontology/obi/issues/1428 @@ -673,7 +673,7 @@ - A induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. + An induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. John Judkins VEuPathDB https://github.com/obi-ontology/obi/issues/1428 @@ -692,7 +692,7 @@ - A induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. + An induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. John Judkins VEuPathDB https://github.com/obi-ontology/obi/issues/1428 diff --git a/src/ontology/templates/specimen-assay-data.tsv b/src/ontology/templates/specimen-assay-data.tsv index 76df0116..08e51c41 100644 --- a/src/ontology/templates/specimen-assay-data.tsv +++ b/src/ontology/templates/specimen-assay-data.tsv @@ -24,9 +24,9 @@ OBI:0003264 bacteria in feces datum A feces microbiology datum that is interp OBI:0003265 eukaryota in feces datum A feces microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass feces microbiology datum Eukaryota OBI:0003266 virus in feces datum A feces microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass feces microbiology datum Viruses OBI:0003267 eukaryota in urine datum A urine microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass urine microbiology datum Eukaryota -OBI:0003268 bacteria in induced sputum datum A induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Bacteria -OBI:0003269 eukaryota in induced sputum datum A induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Eukaryota -OBI:0003270 virus in induced sputum datum A induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Viruses +OBI:0003268 bacteria in induced sputum datum An induced sputum microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Bacteria +OBI:0003269 eukaryota in induced sputum datum An induced sputum microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Eukaryota +OBI:0003270 virus in induced sputum datum An induced sputum microbiology datum that is interpreted as an indication of the presence of viruses in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass induced sputum microbiology datum Viruses OBI:0003271 bacteria in endotracheal tube aspirate datum An endotracheal tube aspirate microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass endotracheal tube aspirate microbiology datum Bacteria OBI:0003272 bacteria in lung datum A lung microbiology datum that is interpreted as an indication of the presence of bacteria in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass lung microbiology datum Bacteria OBI:0003273 eukaryota in lung datum A lung microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass lung microbiology datum Eukaryota @@ -40,4 +40,4 @@ OBI:0003280 virus in pleural fluid datum A pleural fluid microbiology datum t OBI:0003281 eukaryota in umbilical cord blood datum An umbilical cord blood microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1428 subclass umbilical cord blood microbiology datum Eukaryota OBI:0003365 milk assay datum A data item that is the specified output of a milk assay. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1515 subclass data item milk assay OBI:0003382 placental blood microbiology datum An organism identification assay that is the specified output of a placental blood microbiology assay. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1297 subclass organism identification datum placental blood microbiology assay -OBI:0003383 eukaryota in placental blood datum A placental blood microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1297 subclass placental blood microbiology datum Eukaryota \ No newline at end of file +OBI:0003383 eukaryota in placental blood datum A placental blood microbiology datum that is interpreted as an indication of the presence of eukaryota in the specimen. VEuPathDB John Judkins https://github.com/obi-ontology/obi/issues/1297 subclass placental blood microbiology datum Eukaryota