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Releases: obi-ontology/obi

2024-06-10 Release

10 Jun 19:51
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This release of OBI imports IAO as a module with selected terms, rather than importing all of IAO (see #1764).

New terms added:

ID Label
OBI:0003652 albumin-free serum
OBI:0003653 fasting
OBI:0003654 overnight fasting
OBI:0003655 fasted
OBI:0003657 minimum resolved unit of measurement

2024-01-09 Release

22 Jan 19:53
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New terms added:

ID Label
OBI:0003335 diffusion weighted magnetic resonance image data set
OBI:0003336 functional magnetic resonance image data set
OBI:0003337 resting state functional magnetic resonance image data set
OBI:0003338 task-based functional magnetic resonance image data set
OBI:0003339 perfusion weighted magnetic resonance image data set
OBI:0003340 proton density magnetic resonance image data set
OBI:0003341 T1 weighted magnetic resonance image data set
OBI:0003342 post-Gd T1 weighted magnetic resonance image data set
OBI:0003343 T1 weighted GRE magnetic resonance image data set
OBI:0003344 high resolution T1 weighted magnetic resonance image data set
OBI:0003345 baseline high resolution T1 weighted magnetic resonance image data set
OBI:0003346 follow-up high resolution T1 weighted magnetic resonance image data set
OBI:0003347 T1 weighted SE magnetic resonance image data set
OBI:0003348 T2 weighted magnetic resonance image data set
OBI:0003349 T2 weighted FLAIR magnetic resonance image data set
OBI:0003350 T2 weighted FSE magnetic resonance image data set
OBI:0003351 T2 weighted SE magnetic resonance image data set
OBI:0003352 T2 weighted STIR magnetic resonance image data set
OBI:0003353 T2* weighted GRE magnetic resonance image data set
OBI:0003357 brain region atlas image data set
OBI:0003358 probabilistic brain region atlas image dataset
OBI:0003359 deterministic brain region atlas image data set
OBI:0003360 image segmentation map
OBI:0003361 lesion mask
OBI:0003362 T1 lesion mask
OBI:0003363 T2 FLAIR lesion mask
OBI:0003553 intragastric administration
OBI:0003554 intracolonic administration
OBI:0003555 vaginal administration
OBI:0003556 topical administration
OBI:0003557 cervical administration
OBI:0003558 conjunctival administration
OBI:0003559 intratracheal administration
OBI:0003560 intra-amniotic administration
OBI:0003561 intra-arterial administration
OBI:0003562 intracerebral administration
OBI:0003563 intracranial administration
OBI:0003564 intraepidermal administration
OBI:0003565 intralymphatic administration
OBI:0003566 lymph node administration
OBI:0003567 urethral administration
OBI:0003568 skin scarification administration
OBI:0003569 intrauteral administration
OBI:0003570 intracarotid administration
OBI:0003571 intraocular administration
OBI:0003572 intraplacental administration
OBI:0003573 intrarectal administration
OBI:0003574 intrasplenic administration
OBI:0003575 scratching
OBI:0003603 intratumoral administration
OBI:0003607 disease causation objective
OBI:0003608 disease severity reduction objective
OBI:0003609 disease prevention objective
OBI:0003610 reactant role
OBI:0003611 precursor role
OBI:0003612 electron microscopy assay determining the 3D structure of a T cell epitope:MHC:TCR complex
OBI:0003613 electron microscopy assay determining the 3D structure of a MHC:ligand complex
OBI:0003614 disease prevalence reduction objective
OBI:0003615 antibody purification of MHC protein complex
OBI:0003616 antibody purification of MHC class I protein complex
OBI:0003617 antibody purification of human MHC class I protein complex
OBI:0003618 antibody purification of HLA protein complex with A2 serotype
OBI:0003619 antibody purification of HLA protein complex with A24 serotype
OBI:0003620 antibody purification of HLA protein complex with A2 serotype and/or HLA protein complex with A28 serotype
OBI:0003621 antibody purification of HLA protein complex with A29 serotype
OBI:0003622 antibody purification of HLA protein complex with B27 serotype
OBI:0003623 antibody purification of HLA-C protein complex
OBI:0003624 antibody purification of pig MHC class I protein complex
OBI:0003625 antibody purification of cattle MHC class I protein complex
OBI:0003626 antibody purification of rat MHC class I protein complex
OBI:0003627 antibody purification of mouse MHC class I protein complex
OBI:0003628 antibody purification of H2-Dd protein complex
OBI:0003629 antibody purification of H2-Db protein complex
OBI:0003630 antibody purification of H2-Kd protein complex
OBI:0003631 antibody purification of H2-Ld protein complex, H2-Db protein complex, and/or H2-Dq protein complex
OBI:0003632 antibody purification of H2-Dd protein complex and/or H2-Kd protein complex
OBI:0003633 antibody purification of mouse MHC class I protein complex with H2-b haplotype and/or mouse MHC protein complex with H2-p haplotype
OBI:0003634 antibody purification of H2-Kb protein complex, H2-Ks protein complex, and/or H2-Kq protein complex
OBI:0003635 antibody purification of pig MHC class I protein complex, cattle MHC class I protein complex, and/or human MHC class I protein complex
OBI:0003636 antibody purification of MHC class II protein complex
OBI:0003637 antibody purification of cattle MHC class II protein complex
OBI:0003638 antibody purification of human MHC class II protein complex
OBI:0003639 antibody purification of HLA-DP protein complex
OBI:0003640 antibody purification of HLA-DR protein complex
OBI:0003641 antibody purification of HLA protein complex with DQ3 serotype
OBI:0003642 antibody purification of mouse MHC class II protein complex
OBI:0003643 antibody purification of H2-IA protein complex
OBI:0003644 antibody purification of H2-IAg7 protein complex
OBI:0003645 antibody purification of H2-IAd protein complex
OBI:0003646 antibody purification of mouse MHC class II protein complex and/or rat MHC class II protein complex with RT1-A haplotype
OBI:0003647 tandem mass spectrometry analysis
OBI:0003648 liquid chromatrography mass spectrometry analysis
OBI:0003649 liquid chromatography-tandem mass spectrometry analysis
OBI:0003650 Illumina Infinium MethylationEPIC v2.0 BeadChip
OBI:0003651 multidimensional fatigue inventory score

2023-09-20 Release

02 Oct 18:51
40adf3b
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New terms added:

ID Label
OBI:0003587 cell culture assay
OBI:0003589 serum anti-Epstein-Barr virus antibody level assay
OBI:0003590 serum anti-cytomegalovirus antibody level assay
OBI:0003591 chronic allograft damage index score
OBI:0003592 sequential organ failure assessment score
OBI:0003593 physician's global assessment of disease activity
OBI:0003594 human leukocyte antigen mismatch count
OBI:0003595 nasal lavage fluid
OBI:0003598 single cell B cell receptor repertoire sequencing assay
OBI:0003599 single cell T cell receptor repertoire sequencing assay
OBI:0003600 hypertension grade
OBI:0003601 quartz crystal microbalance assay
OBI:0003602 quartz crystal microbalance assay measuring the dissociation constant [KD] of a B cell epitope:antibody complex
OBI:0003604 multiplexed error-robust fluorescence in situ hybridization assay
OBI:0003605 single molecule fluorescence in situ hybridization
OBI:0003606 Illumina NextSeq 1000

2023-07-25 Release

25 Jul 17:48
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New terms added:

ID Label
OBI:0003333 computed image data set
OBI:0003334 reconstructed magnetic resonance image data set
OBI:0003354 raw magnetic resonance image data set
OBI:0003356 raw magnetic resonance image data set reconstruction
OBI:0003547 liquid chromatography
OBI:0003548 upper limit of detection
OBI:0003549 lower limit of detection
OBI:0003550 odor baited CDC light trap
OBI:0003551 resting clay pot trap
OBI:0003552 proximity ligation-assisted ChIP-seq
OBI:0003576 skin of body microbiology assay
OBI:0003577 skin of body microbiology datum
OBI:0003578 bone marrow microbiology assay
OBI:0003579 bone marrow microbiology datum
OBI:0003580 nasal aspirate microbiology assay
OBI:0003581 nasal aspirate microbiology datum
OBI:0003582 cell proliferation assay using carboxyfluorescein succinimidyl ester staining
OBI:0003583 cell viability assay
OBI:0003584 cell viability assay using Annexin V staining
OBI:0003585 carboxyfluorescein succinimidyl ester staining
OBI:0003586 Annexin V staining

2023-03-10 Release

23 Mar 15:35
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New terms added:

ID Label
OBI:0003250 biomedical laboratory organization
OBI:0003327 image data set
OBI:0003328 magnetic resonance image data set
OBI:0003329 magnetic resonance imaging participant
OBI:0003330 magnetic resonance imaging evaluant role
OBI:0003331 raw image data set
OBI:0003332 magnetic resonance pulse sequence protocol
OBI:0003355 image data set analysis
OBI:0003489 Scrub Typhus Detect IgM ELISA kit
OBI:0003490 Panbio Dengue IgM capture ELISA kit
OBI:0003491 Panbio Dengue Early ELISA kit
OBI:0003492 SD Bioline Chikungunya IgM RDT kit
OBI:0003493 SD Bioline Chikungunya IgM capture ELISA kit
OBI:0003494 Advantage Chikungunya IgM Card kit
OBI:0003495 Abbott
OBI:0003496 J. Mitra
OBI:0003497 InBios
OBI:0003498 organism detection assay
OBI:0003501 functional assessment of individual
OBI:0003502 facial atrophy assessment
OBI:0003503 tongue atrophy assessment
OBI:0003504 forced cough assessment
OBI:0003505 speech test assessment
OBI:0003506 finger to finger assessment
OBI:0003507 nose to finger assessment
OBI:0003508 dysmetria assessment
OBI:0003509 rapid alternating hands assessment
OBI:0003510 finger taps assessment
OBI:0003511 heel along shin assessment
OBI:0003512 heel to shin assessment
OBI:0003513 muscle atrophy assessment
OBI:0003514 muscle weakness assessment
OBI:0003515 vibratory sense assessment
OBI:0003516 position sense assessment
OBI:0003517 deep tendon reflex assessment
OBI:0003518 limits of stability assessment
OBI:0003519 sitting posture assessment
OBI:0003520 stance feet apart assessment
OBI:0003521 stance feet apart assessment, with eyes closed
OBI:0003522 stance feet together assessment
OBI:0003523 stance feet together assessment, with eyes closed
OBI:0003524 tandem stance assessment
OBI:0003525 stance on one foot assessment
OBI:0003526 tandem walk assessment
OBI:0003527 gait assessment
OBI:0003528 bulbar assessment
OBI:0003529 spontaneous speech assessment
OBI:0003530 limb coordination assessment
OBI:0003531 upper limb coordination assessment
OBI:0003532 lower limb coordination assessment
OBI:0003533 nervous system functionality assessment
OBI:0003534 upright stability assessment
OBI:0003535 deep tendon reflex assessment of the knee joint
OBI:0003536 observational assessment of individual
OBI:0003537 deep tendon reflex assessment of the ankle joint
OBI:0003538 deep tendon reflex assessment of the tendon of biceps brachii
OBI:0003539 deep tendon reflex assessment of the brachioradialis
OBI:0003540 tandem mass spectrometry assay
OBI:0003541 ELISA measuring Orientia tsutsugamushi IgM antibody
OBI:0003542 microarray assay measuring Dengue IgM antibody
OBI:0003543 microarray assay measuring NS1
OBI:0003544 analytical chromatography measuring Chikungunya IgM antibody
OBI:0003545 ELISA measuring Chikungunya IgM antibody
OBI:0003546 microarray ELISA measuring Chikungunya IgM antibody

2022-12-14 Release

14 Dec 15:11
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Known issues: We have plans for a future release to change classes that are currently descendants of organism identification assay to fall under a broader term to include assays that identify organisms on a level other than species and assays that detect the quantity of a type of organism. This planned change will also include the corresponding assay output data items.

New terms added:

ID Label
OBI:0003384 synaptosome preparation process
OBI:0003386 Illumina HiSeq 1500
OBI:0003387 NextSeq 550
OBI:0003388 Agilent-026655 Whole Mouse Genome Microarray 4x44K v2
OBI:0003389 Agilent-030493 SurePrint G3 Mouse Exon 4x180K Microarray
OBI:0003390 Agilent-074809 SurePrint G3 Mouse GE v2 8x60K Microarray
OBI:0003391 Affymetrix Mouse Genome 430 2.0 Array
OBI:0003392 Affymetrix Mouse Genome 430A 2.0 Array
OBI:0003393 Affymetrix Mouse Gene 1.0 ST Array
OBI:0003394 Affymetrix Mouse Gene 2.1 ST Array
OBI:0003395 Affymetrix Rhesus Macaque Genome Array
OBI:0003396 Affymetrix Human Transcriptome Array 2.0
OBI:0003397 Affymetrix Human Genome U219 Array
OBI:0003398 Affymetrix Human Gene 2.0 ST Array
OBI:0003399 Affymetrix Clariom S Assay, Human
OBI:0003400 Affymetrix Clariom S Assay, Mouse
OBI:0003401 Illumina HumanHT-12 V4.0 expression beadchip
OBI:0003402 Illumina MouseRef-8 v2.0 beadchip
OBI:0003403 Affymetrix Mouse Exon Junction Array
OBI:0003404 Affymetrix Human Exon Junction Array
OBI:0003413 administering substance in vivo to cause disease
OBI:0003414 administering substance in vivo to reduce or prevent disease
OBI:0003415 peripheral blood mononuclear cell specimen
OBI:0003416 mid-upper arm circumference datum
OBI:0003417 antigen specific antibodies assay datum
OBI:0003418 antigen specific antibodies in blood assay
OBI:0003419 antigen specific antibodies in milk assay
OBI:0003420 antigen specific antibodies in blood assay datum
OBI:0003421 antigen specific antibodies in milk assay datum
OBI:0003422 enzymatic activity level assay
OBI:0003423 5'-nucleotidase activity level assay
OBI:0003424 alanine aminotransferase activity level assay
OBI:0003425 alkaline phosphatase activity level assay
OBI:0003426 amylase activity level assay
OBI:0003427 aspartate aminotransferase activity level assay
OBI:0003428 cholinesterase activity level assay
OBI:0003429 creatine kinase activity level assay
OBI:0003430 gamma-glutamyltransferase activity level assay
OBI:0003431 glutamate dehydrogenase activity level assay
OBI:0003432 isocitrate dehydrogenase activity level assay
OBI:0003433 lactate dehydrogenase activity level assay
OBI:0003434 sorbitol dehydrogenase activity level assay
OBI:0003435 acyl-CoA oxidase activity level assay
OBI:0003436 N-acetyl-beta-glucosaminidase activity level assay
OBI:0003437 ribonuclease activity level assay
OBI:0003438 galactosidase activity level assay
OBI:0003454 Mosquito Magnet Liberty Plus trap
OBI:0003455 tumor challenge
OBI:0003456 in vivo challenge
OBI:0003457 epitope protection from infectious challenge experiment based on survival
OBI:0003458 epitope protection from tumor challenge experiment based on burden
OBI:0003459 epitope protection from tumor challenge experiment based on survival
OBI:0003460 in vivo assay measuring T cell epitope specific protection from pathogen challenge
OBI:0003461 in vivo assay measuring T cell epitope specific protection from tumor challenge
OBI:0003462 in vivo assay measuring T cell epitope specific protection from other challenge
OBI:0003463 in vivo assay measuring T cell epitope specific survival after tumor challenge
OBI:0003464 in vivo assay measuring T cell epitope specific survival after pathogen challenge
OBI:0003465 in vivo assay measuring B cell epitope specific protection from pathogen challenge
OBI:0003466 in vivo assay measuring B cell epitope specific protection from tumor challenge
OBI:0003467 in vivo assay measuring B cell epitope specific protection from other challenge
OBI:0003468 in vivo assay measuring B cell epitope specific survival after pathogen challenge
OBI:0003469 in vivo assay measuring B cell epitope specific survival after tumor challenge
OBI:0003470 in vivo assay measuring T cell epitope specific protection from pathogen challenge resulting from the adoptive transfer of epitope specific T cells
OBI:0003471 in vivo assay measuring T cell epitope specific pathogen protection from challenge resulting from the adoptive transfer of epitope specific T cells based on survival
OBI:0003472 in vivo assay measuring T cell epitope specific protection from tumor challenge resulting from the adoptive transfer of epitope specific T cells
OBI:0003473 in vivo assay measuring T cell epitope specific protection from tumor challenge resulting from the adoptive transfer of epitope specific T cells based on survival
OBI:0003474 in vivo assay measuring T cell epitope specific protection from other challenge resulting from the adoptive transfer of epitope specific T cells
OBI:0003475 in vivo assay measuring B cell epitope specific protection from pathogen challenge resulting from the adoptive transfer of epitope specific antibodies or B cells
OBI:0003476 in vivo assay measuring B cell epitope specific pathogen protection from challenge resulting from the adoptive transfer of epitope specific antibodies or B cells based on survival
OBI:0003477 in vivo assay measuring B cell epitope specific protection from tumor challenge resulting from the adoptive transfer of epitope specific antibodies or B cells
OBI:0003478 in vivo assay measuring B cell epitope specific protection from tumor challenge resulting from the adoptive transfer of epitope specific antibodies or B cells based on survival
OBI:0003479 in vivo assay measuring B cell epitope specific protection from other challenge resulting from the adoptive transfer of epitope specific antibodies or B cells
OBI:0003480 Gram stain assay
OBI:0003481 cow-baited arthropod trap
OBI:0003482 lymph specimen
OBI:0003483 digestive tract specimen
OBI:0003484 assay measuring epitope specific interleukin-25 production by T cells
OBI:0003485 detection of specific nucleic acids with complementary probes assay measuring epitope specific interleukin-25 production by T cells
OBI:0003486 intracellular cytokine staining assay measuring epitope specific interleukin-25 production by T cells
OBI:0003487 ELISA measuring epitope specific interleukin-25 production by T cells
OBI:0003488 cell culture analyte detection bioassay measuring epitope specific tumor necrosis factor superfamily cytokine production by T cells

2022-07-11 Release

11 Jul 20:08
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New terms added:

ID Label
OBI:0002830 catheter
OBI:0003297 tyramide signal amplification sequencing assay
OBI:0003298 DNA adenine methyltransferase identification assay
OBI:0003299 DamID-seq
OBI:0003300 nucleolus-associated domain sequencing assay
OBI:0003301 DNase Hi-C assay
OBI:0003302 micro-C assay
OBI:0003303 single cell combinatorial indexing Hi-C assay
OBI:0003304 single nucleus Hi-C assay
OBI:0003305 single cell Hi-C assay
OBI:0003306 bulk Hi-C assay
OBI:0003307 multi-contact Hi-C assay
OBI:0003309 transposase-mediated analysis of chromatin looping assay
OBI:0003310 split-pool recognition of interactions and tag extension assay
OBI:0003311 DNA split-pool recognition of interactions and tag extension assay
OBI:0003312 RNA-DNA split-pool recognition of interactions and tag extension assay
OBI:0003313 genome architecture mapping assay
OBI:0003314 mapping RNA-genome interactions assay
OBI:0003315 assay measuring epitope specific amphiregulin production by T cells
OBI:0003316 ELISA measuring epitope specific amphiregulin production by T cells
OBI:0003317 perforin release during T cell degranulation
OBI:0003318 granzyme A release during T cell degranulation
OBI:0003319 granzyme B release during T cell degranulation
OBI:0003320 granulysin release during T cell degranulation
OBI:0003321 venous blood microbiology assay
OBI:0003323 high throughput multiplexed assay measuring binding of a B cell epitope:antibody complex
OBI:0003324 high throughput multiplexed assay measuring binding of a T cell epitope:MHC:TCR complex
OBI:0003325 high throughput multiplexed assay measuring binding of a MHC:ligand complex
OBI:0003326 high throughput multiplexed assay measuring MHC ligand processing and presentation
OBI:0003365 milk assay datum
OBI:0003366 organism diagnostic process
OBI:0003367 diagnosis of an organism
OBI:0003368 detection technique
OBI:0003369 assay kit
OBI:0003371 epitope specific XCL1 release by T cells
OBI:0003372 assay measuring epitope specific lymphotactin production by T cells
OBI:0003373 ELISA measuring epitope specific lymphotactin production by T cells
OBI:0003374 remote patient assessment
OBI:0003380 placental blood specimen
OBI:0003381 placental blood microbiology assay
OBI:0003382 placental blood microbiology datum
OBI:0003383 eukaryota in placental blood datum
OBI:0003385 has assay target context

2022-01-03 Release

10 Jan 20:36
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Note that this release includes two known issues with bad equivalent classes (#1475, #1476) and missing labels for two deprecated GO terms.

New terms added:

ID Label
OBI:0002776 cytometry analysis by automated gating
OBI:0002777 cytometry analysis by manual gating
OBI:0002816 chromatography vial
OBI:0003087 autofluorescence assay
OBI:0003088 autofluorescence microscopy assay
OBI:0003089 bulk assay for transposase-accessible chromatin using sequencing
OBI:0003090 bulk RNA-seq assay
OBI:0003091 multiplexed fluorescent antibody imaging assay
OBI:0003092 Cell DIVE multiplexed imaging assay
OBI:0003093 co-detection by indexing assay
OBI:0003094 fluorescence in-situ hybridization assay
OBI:0003095 decoding amplified targeted transcripts with fluorescence in situ hybridization assay
OBI:0003096 imaging mass cytometry assay
OBI:0003097 liquid chromatography mass spectrometry assay
OBI:0003098 lightsheet fluorescence microscopy assay
OBI:0003099 matrix assisted laser desorption ionization imaging mass spectrometry assay
OBI:0003100 multiplexed ion beam imaging assay
OBI:0003101 nanospray desorption electrospray ionization assay
OBI:0003102 nanodroplet processing in one pot for trace samples assay
OBI:0003103 periodic acid-Schiff staining assay
OBI:0003104 single cell combinatorial indexing assay for transposase-accessessable chromatin using sequencing
OBI:0003105 single-cell combinatorial indexing RNA sequencing assay
OBI:0003106 sequential fluorescence in-situ hybridization assay
OBI:0003107 slide-seq assay
OBI:0003108 single-nucleus chromatin accessibility and mRNA expression sequencing assay
OBI:0003109 single-nucleus RNA sequencing assay
OBI:0003110 gas chromatography mass spectrometry assay
OBI:0003111 SOMAscan assay
OBI:0003112 Olink assay
OBI:0003113 proximity extension assay
OBI:0003115 antigen detection by cytometric bead array assay
OBI:0003116 antibody detection by cytometric bead array assay
OBI:0003117 3D molecular structure determination assay
OBI:0003118 electron-microscopy 3D molecular structure determination assay
OBI:0003119 antigen:antibody complex
OBI:0003120 epitope:MHC:TCR complex
OBI:0003121 MHC:ligand complex
OBI:0003122 3D cell structure determination assay
OBI:0003123 3D neural cell structure determination assay
OBI:0003124 neuron morphology assay
OBI:0003125 mosaicism with repeat frameshift genetic sparse labeling
OBI:0003126 neuron morphology reconstruction assay
OBI:0003127 B cell epitope assay
OBI:0003128 T cell epitope assay
OBI:0003129 chemical mutagenesis
OBI:0003130 irradiation mutagenesis
OBI:0003131 directed mutagenesis
OBI:0003132 endonuclease mediated mutagenesis
OBI:0003133 cas mediated mutagenesis
OBI:0003134 TALEN mediated mutagenesis
OBI:0003135 zinc finger mediated mutagenesis
OBI:0003136 transgenic mutagenesis
OBI:0003137 gene-trap mutagenesis
OBI:0003138 enhancer-trap mutagenesis
OBI:0003139 targeted mutagenesis
OBI:0003140 transposon-induced mutagenesis
OBI:0003141 categorical binding datum
OBI:0003142 quantitative binding datum
OBI:0003143 EC50 binding datum
OBI:0003144 IC50 binding datum
OBI:0003145 assay measuring quantitative binding of a MHC:ligand complex
OBI:0003146 assay measuring quantitative binding of an antigen:antibody complex
OBI:0003147 assay measuring quantitative binding of an epitope:MHC:TCR complex
OBI:0003148 albumin concentration assay
OBI:0003149 basophil percentage assay
OBI:0003150 calcium cation concentration assay
OBI:0003151 chloride concentration assay
OBI:0003152 cholesterol concentration assay
OBI:0003153 creatinine concentration assay
OBI:0003154 eosinophil percentage assay
OBI:0003155 globulin concentration assay
OBI:0003156 hemoglobin concentration assay
OBI:0003157 high-density lipoprotein cholesterol concentration assay
OBI:0003158 iron concentration assay
OBI:0003159 low-density lipoprotein cholesterol concentration assay
OBI:0003160 lymphocyte percentage assay
OBI:0003161 metamyelocyte count assay
OBI:0003162 metamyelocyte percentage assay
OBI:0003163 methemoglobin percentage assay
OBI:0003164 monocyte percentage assay
OBI:0003165 myelocyte count assay
OBI:0003166 neutrophil percentage assay
OBI:0003167 phosphate ion concentration assay
OBI:0003168 potassium(1+) concentration assay
OBI:0003170 reticulocyte percentage assay
OBI:0003171 sodium(1+) concentration assay
OBI:0003172 thyroid stimulating hormone concentration assay
OBI:0003173 triglyceride concentration assay
OBI:0003174 3,3',5'-triiodothyronine concentration assay
OBI:0003175 fibrinogen concentration assay
OBI:0003176 free thyroxine concentration assay
OBI:0003177 total thyroxine concentration assay
OBI:0003180 direct bilirubin concentration assay
OBI:0003181 indirect bilirubin concentration assay
OBI:0003182 total bilirubin concentration assay
OBI:0003183 mean cell hemoglobin assay
OBI:0003184 mean cell hemoglobin concentration assay
OBI:0003185 mean platelet volume assay
OBI:0003186 immature neutrophil count assay
OBI:0003187 immature neutrophil percentage assay
OBI:0003188 nucleated erythrocyte percentage assay
OBI:0003189 mean cell volume assay
OBI:0003190 erythrocyte assay
OBI:0003191 manual hematocrit assay
OBI:0003192 adiponectin assay
OBI:0003193 adiponectin concentration assay
OBI:0003194 creatine assay
OBI:0003195 creatine concentration assay
OBI:0003196 estradiol assay
OBI:0003197 estradiol concentration assay
OBI:0003202 leptin assay
OBI:0003203 leptin concentration assay
OBI:0003204 lipoprotein concentration assay
OBI:0003205 high-density lipoprotein concentration assay
OBI:0003206 low-density lipoprotein concentration assay
OBI:0003207 very-low-density lipoprotein concentration assay
OBI:0003208 luteinizing hormone assay
OBI:0003209 luteinizing hormone concentration assay
OBI:0003210 nitrite assay
OBI:0003211 nitrite concentration assay
OBI:0003212 phospholipid assay
OBI:0003213 phospholipid concentration assay
OBI:0003214 progesterone assay
OBI:0003215 progesterone concentration assay
OBI:0003216 testosterone assay
OBI:0003217 testosterone concentration assay
OBI:0003218 bile salt assay
OBI:0003219 bile salt concentration assay
OBI:0003220 fatty acid assay
OBI:0003221 free fatty acid concentration assay
OBI:0003222 insulin assay
OBI:0003223 insulin concentration assay
OBI:0003224 follicle stimulating hormone assay
OBI:0003225 follicle stimulating hormone concentration assay
OBI:0003226 total lymphocyte count assay
OBI:0003227 total lymphocyte percentage assay
OBI:0003228 fluorescent immunospot assay
OBI:0003229 plasma proteomics assay
OBI:0003230 T cell activation induced marker assay
OBI:0003231 leukapheresis
OBI:0003232 cerebrospinal fluid assay
OBI:0003233 endotracheal aspirate assay
OBI:0003234 induced sputum assay
OBI:0003235 lung assay
OBI:0003236 milk assay
OBI:0003237 feces assay
OBI:0003238 umbilical cord blood assay
OBI:0003239 saliva assay
OBI:0003240 cerebrospinal fluid microbiology assay
OBI:0003241 endotracheal tube aspirate microbiology assay
OBI:0003242 induced sputum microbiology assay
OBI:0003243 blood assay datum
OBI:0003244 blood microbiology datum
OBI:0003245 feces assay datum
OBI:0003246 feces microbiology datum
OBI:0003247 urine assay datum
OBI:0003248 urine microbiology datum
OBI:0003249 induced sputum assay datum
OBI:0003251 induced sputum microbiology datum
OBI:0003252 cerebrospinal fluid assay datum
OBI:0003253 cerebrospinal fluid microbiology datum
OBI:0003254 endotracheal aspirate assay datum
OBI:0003255 endotracheal tube aspirate microbiology datum
OBI:0003256 lung microbiology datum
OBI:0003257 nasopharyngeal or oropharyngeal swab microbiology datum
OBI:0003258 pleural fluid microbiology datum
OBI:0003259 umbilical cord blood assay datum
OBI:0003260 umbilical cord blood microbiology datum
OBI:0003261 bacteria in blood datum
OBI:0003262 virus in blood datum
OBI:0003263 eukaryota in blood datum
OBI:0003264 bacteria in feces datum
OBI:0003265 eukaryota in feces datum
OBI:0003266 virus in feces datum
OBI:0003267 eukaryota in urine datum
OBI:0003268 bacteria in induced sputum datum
OBI:0003269 eukaryota in induced sputum datum
OBI:0003270 virus in induced sputum datum
OBI:0003271 bacteria in endotracheal tube aspirate datum
OBI:0003272 bacteria in lung datum
OBI:0003273 eukaryota in lung datum
OBI:0003274 virus in lung datum
OBI:0003275 bacteria in nasopharyngeal or oropharyngeal swab datum
OBI:0003276 eukaryota in nasopharyngeal or oropharyngeal swab datum
OBI:0003277 virus in nasopharyngeal or oropharyngeal swab datum
OBI:0003278 bacteria in pleural fluid datum
OBI:0003279 eukaryota in pleural fluid datum
OBI:0003280 virus in pleural fluid datum
OBI:0003281 eukaryota in umbilical cord blood datum
OBI:0003282 lung microbiology assay
OBI:0003283 pleural fluid microbiology assay
OBI:0003284 umbilical cord blood microbiology assay
OBI:0003285 nasopharyngeal or oropharyngeal swab microbiology assay
OBI:0003286 urine microbiology assay
OBI:0003287 multiplex real time polymerase chain reaction assay
OBI:0003288 multiplex real time reverse-transcription polymerase chain reaction assay
OBI:0003289 mosquito membrane feeding device
OBI:0003290 mosquito membrane feeding assay
OBI:0003291 in silico design
OBI:0003292 cytometric bead array assay measuring epitope specific granulysin release by T cells
OBI:0003293 cytometric bead array assay measuring epitope specific perforin release by T cells
OBI:0003294 modified acid-fast stain microscopy assay
OBI:0003295 positive binding datum
OBI:0003296 antibodies from lymphocyte secretions assay

2021-08-18 Release

23 Aug 20:12
3d19b34
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This release includes 77 new terms:

ID Label
OBI:0002946 fluorescence imaging-based apoptosis assay
OBI:0002947 fluorescence imaging-based cell proliferation assay
OBI:0002948 fluroescence imaging-based cell cycle state assay
OBI:0002949 fluorescence imaging-based cell viability assay
OBI:0002950 fluorescence imaging-based drug synergy assay
OBI:0002951 fluorescence imaging-based cell morphology assay
OBI:0002952 fluorescence imaging multiplex cytological profiling
OBI:0002953 protein state assay
OBI:0002954 fluorescence imaging-based protein phosphorylation state assay
OBI:0002955 mass spectrometry-based protein state assay
OBI:0002956 targeted, drug-modulated, mass spectrometry-based protein phoshporylation-state assay
OBI:0002957 reverse phase protein array profiling assay
OBI:0002958 SWATH-MS protein profiling assay
OBI:0002959 tandem mass tag mass spectrometry
OBI:0002960 fluorescence imaging-based reporter gene assay
OBI:0002961 global chromatin profiling by mass spectrometry assay
OBI:0002962 kinase inhibitor assay
OBI:0002963 KINOMEscan assay
OBI:0002964 KiNativ assay
OBI:0002965 landmark transcript profiling assay
OBI:0002966 microenvironment microarray assay
OBI:0002967 microwestern meso-scale quantitative western blot assay
OBI:0002968 positive/negative ion switching metabolite profiling assay
OBI:0002969 cyclic immunoflouroescence assay
OBI:0002970 multiplex bead-based protein state immunoassay
OBI:0003029 barcode target locus role
OBI:0003030 oligonucleotide primer set
OBI:0003031 fluorogenic PCR assay
OBI:0003032 genotyping by PCR assay
OBI:0003033 cleavage under targets and release using nuclease assay
OBI:0003034 cleavage under targets and tagmentation
OBI:0003035 coma severity assay
OBI:0003036 Plasmodium gametocyte detection assay
OBI:0003037 malaria rapid diagnosis assay
OBI:0003038 parasite detection assay
OBI:0003039 feces microbiology assay
OBI:0003040 blood assay
OBI:0003041 falcivax rapid diagnostic test
OBI:0003042 optimal-IT rapid diagnostic test
OBI:0003043 urine assay
OBI:0003044 parasite species identification by PCR assay
OBI:0003045 parasite detection by PCR assay
OBI:0003046 free-standing window trap
OBI:0003048 BG-lure scent dispenser
OBI:0003049 hand-held sweep net
OBI:0003050 Centers for Disease Control and Prevention gravid trap
OBI:0003051 egg specimen collection process
OBI:0003052 larval specimen collection process
OBI:0003053 pupal specimen collection process
OBI:0003054 blood specimen in vacutainer
OBI:0003055 blood specimen on filter paper
OBI:0003056 proportion mapped reads
OBI:0003057 antibiotic administration process
OBI:0003063 insecticide resistance datum
OBI:0003064 organism identification datum
OBI:0003066 easting coordinate measurement datum
OBI:0003067 northing coordinate measurement datum
OBI:0003068 clinical study center
OBI:0003069 sequencing protocol
OBI:0003070 specimen collection protocol
OBI:0003071 participant identifier
OBI:0003072 axillary temperature measurement datum
OBI:0003073 organismal body temperature measurement datum
OBI:0003074 common name of organism
OBI:0003075 age since birth at time of enrollment
OBI:0003076 age since birth at time of visit
OBI:0003077 entomological data item
OBI:0003079 temperature measurement datum
OBI:0003080 organismal body temperature measurement assay
OBI:0003081 extraction date
OBI:0003082 extraction duration time
OBI:0003083 specimen collection time post disease onset
OBI:0003084 specimen collection time post infection
OBI:0003085 laboratory postal address
OBI:0003086 laboratory-based population
OBI:0003114 Illumina MiniSeq
OBI:2100402 pooled clone sequencing assay

2021-04-06 Release

13 Apr 20:38
8435697
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This release includes 488 new terms

ID Label
OBI:0002786 personal protective device
OBI:0002787 face mask
OBI:0002788 non-medical mask
OBI:0002789 medical mask
OBI:0002790 N95 respirator
OBI:0002791 face shield
OBI:0002792 patient gown
OBI:0002793 scrubs
OBI:0002794 reusable patient gown
OBI:0002795 disposable patient gown
OBI:0002796 medical gown
OBI:0002797 apron
OBI:0002798 surgical gown
OBI:0002799 personal protective glove
OBI:0002800 personal protective clothing item
OBI:0002802 laboratory coat
OBI:0002803 medical glove
OBI:0002804 nitrile glove
OBI:0002805 transparent droplet barrier
OBI:0002806 footwear cover
OBI:0002807 disposable footwear cover
OBI:0002808 reusable footwear cover
OBI:0002809 surgical N95 respirator
OBI:0002810 protective coverall
OBI:0002811 protective sleeve
OBI:0002812 protective apron
OBI:0002813 medical cap
OBI:0002814 specimen collection device
OBI:0002819 specimen pad
OBI:0002820 specimen collection swab stick
OBI:0002821 cotton swab
OBI:0002822 drag swab
OBI:0002823 pre-moistened swab stick
OBI:0002824 surface wipe
OBI:0002975 input protein sequence start site
OBI:0002976 input protein sequence stop site
OBI:0002977 input gene sequence start site
OBI:0002978 input gene sequence stop site
OBI:0002979 reference protein sequence start site
OBI:0002980 reference protein sequence stop site
OBI:0002981 reference gene sequence start site
OBI:0002982 reference gene sequence stop site
OBI:0002983 altitude measurement datum
OBI:0002984 capture Hi-C assay
OBI:0002985 magnetic resonance imaging assay
OBI:0002986 computed tomography imaging assay
OBI:0002987 positron emission tomography imaging assay
OBI:0002988 specimen collection duration
OBI:0002989 material supplier
OBI:0002990 T cell receptor repertoire sequencing assay
OBI:0002991 B cell receptor repertoire sequencing assay
OBI:0002992 prevalence of pathogen in specimens
OBI:0002993 prevalence of blood meal specimens from a host organism
OBI:0002994 presence of blood from host organism in blood meal specimen
OBI:0002995 blood meal source organism
OBI:0002996 blood meal source role
OBI:0002997 arthropod attractor role
OBI:0002998 arthropod collection process with automated identification
OBI:0002999 gravid female arthropod specimen collection process
OBI:0003000 resting flight-capable arthropod specimen collection process
OBI:0003001 daytime arthropod specimen collection by aspiration
OBI:0003002 arthropod resting in human house specimen collection by aspiration
OBI:0003003 landing arthropod specimen collection process
OBI:0003004 flying adult arthropod collection process by passive interception
OBI:0003005 device for resting of adult arthropods for collection
OBI:0003006 well net for arthropod immatures
OBI:0003007 arthropod trap containing small non-human animal bait
OBI:0003008 trap for emerging adult arthropods
OBI:0003009 ferritin assay
OBI:0003010 fibrinogen assay
OBI:0003011 iron assay
OBI:0003012 ionized calcium assay
OBI:0003013 transferrin assay
OBI:0003014 uric acid assay
OBI:0003015 globulin assay
OBI:0003016 myelocyte assay
OBI:0003017 metamyelocyte assay
OBI:0003018 hematocrit assay
OBI:0003019 promyelocyte assay
OBI:0003021 basophil assay
OBI:0003022 neutrophil assay
OBI:0003023 eosinophil assay
OBI:0003024 lymphocyte assay
OBI:0003025 monocyte assay
OBI:0003026 reticulocyte assay
OBI:0003027 macrophage assay
OBI:0003028 platelet assay
OBI:2100001 carbon dioxide assay
OBI:2100002 sodium(1+) assay
OBI:2100003 creatinine assay
OBI:2100004 potassium(1+) assay
OBI:2100005 basophil count assay
OBI:2100006 neutrophil count assay
OBI:2100007 eosinophil count assay
OBI:2100008 lymphocyte count assay
OBI:2100009 monocyte count assay
OBI:2100010 chloride assay
OBI:2100011 erythrocyte count assay
OBI:2100012 platelet count assay
OBI:2100013 leukocyte count assay
OBI:2100014 hemoglobin assay
OBI:2100015 phosphate ion assay
OBI:2100016 alanine aminotransferase assay
OBI:2100017 alkaline phosphatase (human) assay
OBI:2100018 bilirubin IXalpha assay
OBI:2100019 aspartate aminotransferase (human) assay
OBI:2100020 glucose assay
OBI:2100021 magnesium cation assay
OBI:2100022 albumin assay
OBI:2100023 protein assay
OBI:2100024 calcium cation assay
OBI:2100025 creatine kinase assay
OBI:2100026 nucleate erythrocyte count assay
OBI:2100027 segmented neutrophil of bone marrow count assay
OBI:2100028 lactate dehydrogenase complex assay
OBI:2100029 triglyceride assay
OBI:2100030 high-density lipoprotein cholesterol assay
OBI:2100031 cholesterol assay
OBI:2100032 low-density lipoprotein cholesterol assay
OBI:2100033 thyroid stimulating hormone assay
OBI:2100034 prostate-specific antigen assay
OBI:2100035 thyroxine assay
OBI:2100036 elemental oxygen assay
OBI:2100037 folic acids assay
OBI:2100038 reticulocyte count assay
OBI:2100039 osmolality assay
OBI:2100040 methemoglobin assay
OBI:2100041 cytosolic creatine kinase complex, MB-type assay
OBI:2100042 rac-lactic acid assay
OBI:2100043 hydrogencarbonate assay
OBI:2100044 vancomycin assay
OBI:2100045 tobramycin assay
OBI:2100046 3,3',5'-triiodothyronine assay
OBI:2100047 C-reactive protein assay
OBI:2100048 megakaryocyte count assay
OBI:2100049 mesothelial cell count assay
OBI:2100050 macrophage count assay
OBI:2100051 3-hydroxybutyric acid assay
OBI:2100052 panel5 venous blood carbon dioxide assay
OBI:2100053 panel5 venous blood sodium assay
OBI:2100054 panel5 venous blood creatinine assay
OBI:2100055 panel5 venous blood potassium assay
OBI:2100056 automated differential venous blood basophil count assay
OBI:2100057 automated differential venous blood neutrophil count assay
OBI:2100058 automated differential venous blood eosinophil count assay
OBI:2100059 automated differential venous blood lymphocyte count assay
OBI:2100060 automated differential venous blood monocyte count assay
OBI:2100061 venous blood chloride assay
OBI:2100062 CBC with automated differential venous blood RBC count assay
OBI:2100063 CBC with automated differential venous blood platelet count assay
OBI:2100064 CBC with automated differential venous blood WBC count assay
OBI:2100065 CBC with automated differential venous blood hematocrit assay
OBI:2100066 CBC with automated differential venous blood hemoglobin assay
OBI:2100067 venous blood phosphate assay
OBI:2100068 liver injury venous blood alanine aminotransferase assay
OBI:2100069 liver injury venous blood human alkaline phosphatase assay
OBI:2100070 liver injury venous blood bilirubin assay
OBI:2100071 liver injury venous blood human aspartate aminotransferase assay
OBI:2100072 venous blood glucose assay
OBI:2100073 venous blood magnesium assay
OBI:2100074 CBC venous blood RBC count assay
OBI:2100075 CBC venous blood WBC count assay
OBI:2100076 CBC venous blood hematocrit assay
OBI:2100077 CBC venous blood platelet count assay
OBI:2100078 CBC venous blood hemoglobin assay
OBI:2100079 corrected venous blood leukocyte count assay
OBI:2100080 liver evaluation venous blood bilirubin assay
OBI:2100081 liver evaluation venous blood globulin assay
OBI:2100082 liver evaluation venous blood albumin assay
OBI:2100083 liver evaluation venous blood human aspartate aminotransferase assay
OBI:2100084 liver evaluation venous blood alanine aminotransferase assay
OBI:2100085 liver evaluation venous blood human alkaline phosphatase assay
OBI:2100086 liver evaluation venous blood protein assay
OBI:2100087 basic metabolic panel venous blood chloride assay
OBI:2100088 basic metabolic panel venous blood potassium assay
OBI:2100089 basic metabolic panel venous blood sodium assay
OBI:2100090 basic metabolic panel venous blood creatinine assay
OBI:2100091 basic metabolic panel venous blood glucose assay
OBI:2100092 basic metabolic panel venous blood calcium assay
OBI:2100093 basic metabolic panel venous blood carbon dioxide assay
OBI:2100094 venous blood creatine kinase assay
OBI:2100095 venous blood calcium assay
OBI:2100096 venous blood ferritin assay
OBI:2100097 total venous blood calcium assay
OBI:2100098 venous blood iron assay
OBI:2100099 CBC with manual differential venous blood band neutrophil count assay
OBI:2100100 CBC with manual differential venous blood WBC count assay
OBI:2100101 CBC with manual differential venous blood eosinophil count assay
OBI:2100102 CBC with manual differential venous blood lymphocyte count assay
OBI:2100103 CBC with manual differential venous blood nucleated RBC count assay
OBI:2100104 CBC with manual differential venous blood monocyte count assay
OBI:2100105 CBC with manual differential venous blood segmented neutrophil count assay
OBI:2100106 CBC with manual differential venous blood basophil count assay
OBI:2100107 venous blood albumin assay
OBI:2100108 cardiac enzymes venous blood creatine kinase assay
OBI:2100109 venous blood haptoglobin assay
OBI:2100110 venous blood lactate dehydrogenase assay
OBI:2100111 venous blood prealbunin assay
OBI:2100112 lipid panel venous blood triglyceride assay
OBI:2100113 lipid panel venous blood high density lipoprotein assay
OBI:2100114 lipid panel venous blood cholesterol assay
OBI:2100115 lipid panel venous blood low density lipoprotein assay
OBI:2100116 venous blood hemoglobin A1c assay
OBI:2100117 venous blood uric acid assay
OBI:2100118 total venous blood protein assay
OBI:2100119 venous blood thyroid stimulating hormone assay
OBI:2100120 venous blood prostate specific antigen assay
OBI:2100121 24 hour total urine volume assay
OBI:2100122 T4 uptake venous blood T4 assay
OBI:2100123 arterial blood glucose assay
OBI:2100124 CBC with manual differential venous blood cell count assay
OBI:2100125 hemoglobin oxygen saturation arterial blood oxygen assay
OBI:2100126 hemoglobin oxygen saturation arterial blood hemoglobin assay
OBI:2100127 inpatient profile venous blood sodium assay
OBI:2100128 ...
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