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2022-01-03 Release

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@jamesaoverton jamesaoverton released this 10 Jan 20:36
· 676 commits to master since this release
0b24d7f

Note that this release includes two known issues with bad equivalent classes (#1475, #1476) and missing labels for two deprecated GO terms.

New terms added:

ID Label
OBI:0002776 cytometry analysis by automated gating
OBI:0002777 cytometry analysis by manual gating
OBI:0002816 chromatography vial
OBI:0003087 autofluorescence assay
OBI:0003088 autofluorescence microscopy assay
OBI:0003089 bulk assay for transposase-accessible chromatin using sequencing
OBI:0003090 bulk RNA-seq assay
OBI:0003091 multiplexed fluorescent antibody imaging assay
OBI:0003092 Cell DIVE multiplexed imaging assay
OBI:0003093 co-detection by indexing assay
OBI:0003094 fluorescence in-situ hybridization assay
OBI:0003095 decoding amplified targeted transcripts with fluorescence in situ hybridization assay
OBI:0003096 imaging mass cytometry assay
OBI:0003097 liquid chromatography mass spectrometry assay
OBI:0003098 lightsheet fluorescence microscopy assay
OBI:0003099 matrix assisted laser desorption ionization imaging mass spectrometry assay
OBI:0003100 multiplexed ion beam imaging assay
OBI:0003101 nanospray desorption electrospray ionization assay
OBI:0003102 nanodroplet processing in one pot for trace samples assay
OBI:0003103 periodic acid-Schiff staining assay
OBI:0003104 single cell combinatorial indexing assay for transposase-accessessable chromatin using sequencing
OBI:0003105 single-cell combinatorial indexing RNA sequencing assay
OBI:0003106 sequential fluorescence in-situ hybridization assay
OBI:0003107 slide-seq assay
OBI:0003108 single-nucleus chromatin accessibility and mRNA expression sequencing assay
OBI:0003109 single-nucleus RNA sequencing assay
OBI:0003110 gas chromatography mass spectrometry assay
OBI:0003111 SOMAscan assay
OBI:0003112 Olink assay
OBI:0003113 proximity extension assay
OBI:0003115 antigen detection by cytometric bead array assay
OBI:0003116 antibody detection by cytometric bead array assay
OBI:0003117 3D molecular structure determination assay
OBI:0003118 electron-microscopy 3D molecular structure determination assay
OBI:0003119 antigen:antibody complex
OBI:0003120 epitope:MHC:TCR complex
OBI:0003121 MHC:ligand complex
OBI:0003122 3D cell structure determination assay
OBI:0003123 3D neural cell structure determination assay
OBI:0003124 neuron morphology assay
OBI:0003125 mosaicism with repeat frameshift genetic sparse labeling
OBI:0003126 neuron morphology reconstruction assay
OBI:0003127 B cell epitope assay
OBI:0003128 T cell epitope assay
OBI:0003129 chemical mutagenesis
OBI:0003130 irradiation mutagenesis
OBI:0003131 directed mutagenesis
OBI:0003132 endonuclease mediated mutagenesis
OBI:0003133 cas mediated mutagenesis
OBI:0003134 TALEN mediated mutagenesis
OBI:0003135 zinc finger mediated mutagenesis
OBI:0003136 transgenic mutagenesis
OBI:0003137 gene-trap mutagenesis
OBI:0003138 enhancer-trap mutagenesis
OBI:0003139 targeted mutagenesis
OBI:0003140 transposon-induced mutagenesis
OBI:0003141 categorical binding datum
OBI:0003142 quantitative binding datum
OBI:0003143 EC50 binding datum
OBI:0003144 IC50 binding datum
OBI:0003145 assay measuring quantitative binding of a MHC:ligand complex
OBI:0003146 assay measuring quantitative binding of an antigen:antibody complex
OBI:0003147 assay measuring quantitative binding of an epitope:MHC:TCR complex
OBI:0003148 albumin concentration assay
OBI:0003149 basophil percentage assay
OBI:0003150 calcium cation concentration assay
OBI:0003151 chloride concentration assay
OBI:0003152 cholesterol concentration assay
OBI:0003153 creatinine concentration assay
OBI:0003154 eosinophil percentage assay
OBI:0003155 globulin concentration assay
OBI:0003156 hemoglobin concentration assay
OBI:0003157 high-density lipoprotein cholesterol concentration assay
OBI:0003158 iron concentration assay
OBI:0003159 low-density lipoprotein cholesterol concentration assay
OBI:0003160 lymphocyte percentage assay
OBI:0003161 metamyelocyte count assay
OBI:0003162 metamyelocyte percentage assay
OBI:0003163 methemoglobin percentage assay
OBI:0003164 monocyte percentage assay
OBI:0003165 myelocyte count assay
OBI:0003166 neutrophil percentage assay
OBI:0003167 phosphate ion concentration assay
OBI:0003168 potassium(1+) concentration assay
OBI:0003170 reticulocyte percentage assay
OBI:0003171 sodium(1+) concentration assay
OBI:0003172 thyroid stimulating hormone concentration assay
OBI:0003173 triglyceride concentration assay
OBI:0003174 3,3',5'-triiodothyronine concentration assay
OBI:0003175 fibrinogen concentration assay
OBI:0003176 free thyroxine concentration assay
OBI:0003177 total thyroxine concentration assay
OBI:0003180 direct bilirubin concentration assay
OBI:0003181 indirect bilirubin concentration assay
OBI:0003182 total bilirubin concentration assay
OBI:0003183 mean cell hemoglobin assay
OBI:0003184 mean cell hemoglobin concentration assay
OBI:0003185 mean platelet volume assay
OBI:0003186 immature neutrophil count assay
OBI:0003187 immature neutrophil percentage assay
OBI:0003188 nucleated erythrocyte percentage assay
OBI:0003189 mean cell volume assay
OBI:0003190 erythrocyte assay
OBI:0003191 manual hematocrit assay
OBI:0003192 adiponectin assay
OBI:0003193 adiponectin concentration assay
OBI:0003194 creatine assay
OBI:0003195 creatine concentration assay
OBI:0003196 estradiol assay
OBI:0003197 estradiol concentration assay
OBI:0003202 leptin assay
OBI:0003203 leptin concentration assay
OBI:0003204 lipoprotein concentration assay
OBI:0003205 high-density lipoprotein concentration assay
OBI:0003206 low-density lipoprotein concentration assay
OBI:0003207 very-low-density lipoprotein concentration assay
OBI:0003208 luteinizing hormone assay
OBI:0003209 luteinizing hormone concentration assay
OBI:0003210 nitrite assay
OBI:0003211 nitrite concentration assay
OBI:0003212 phospholipid assay
OBI:0003213 phospholipid concentration assay
OBI:0003214 progesterone assay
OBI:0003215 progesterone concentration assay
OBI:0003216 testosterone assay
OBI:0003217 testosterone concentration assay
OBI:0003218 bile salt assay
OBI:0003219 bile salt concentration assay
OBI:0003220 fatty acid assay
OBI:0003221 free fatty acid concentration assay
OBI:0003222 insulin assay
OBI:0003223 insulin concentration assay
OBI:0003224 follicle stimulating hormone assay
OBI:0003225 follicle stimulating hormone concentration assay
OBI:0003226 total lymphocyte count assay
OBI:0003227 total lymphocyte percentage assay
OBI:0003228 fluorescent immunospot assay
OBI:0003229 plasma proteomics assay
OBI:0003230 T cell activation induced marker assay
OBI:0003231 leukapheresis
OBI:0003232 cerebrospinal fluid assay
OBI:0003233 endotracheal aspirate assay
OBI:0003234 induced sputum assay
OBI:0003235 lung assay
OBI:0003236 milk assay
OBI:0003237 feces assay
OBI:0003238 umbilical cord blood assay
OBI:0003239 saliva assay
OBI:0003240 cerebrospinal fluid microbiology assay
OBI:0003241 endotracheal tube aspirate microbiology assay
OBI:0003242 induced sputum microbiology assay
OBI:0003243 blood assay datum
OBI:0003244 blood microbiology datum
OBI:0003245 feces assay datum
OBI:0003246 feces microbiology datum
OBI:0003247 urine assay datum
OBI:0003248 urine microbiology datum
OBI:0003249 induced sputum assay datum
OBI:0003251 induced sputum microbiology datum
OBI:0003252 cerebrospinal fluid assay datum
OBI:0003253 cerebrospinal fluid microbiology datum
OBI:0003254 endotracheal aspirate assay datum
OBI:0003255 endotracheal tube aspirate microbiology datum
OBI:0003256 lung microbiology datum
OBI:0003257 nasopharyngeal or oropharyngeal swab microbiology datum
OBI:0003258 pleural fluid microbiology datum
OBI:0003259 umbilical cord blood assay datum
OBI:0003260 umbilical cord blood microbiology datum
OBI:0003261 bacteria in blood datum
OBI:0003262 virus in blood datum
OBI:0003263 eukaryota in blood datum
OBI:0003264 bacteria in feces datum
OBI:0003265 eukaryota in feces datum
OBI:0003266 virus in feces datum
OBI:0003267 eukaryota in urine datum
OBI:0003268 bacteria in induced sputum datum
OBI:0003269 eukaryota in induced sputum datum
OBI:0003270 virus in induced sputum datum
OBI:0003271 bacteria in endotracheal tube aspirate datum
OBI:0003272 bacteria in lung datum
OBI:0003273 eukaryota in lung datum
OBI:0003274 virus in lung datum
OBI:0003275 bacteria in nasopharyngeal or oropharyngeal swab datum
OBI:0003276 eukaryota in nasopharyngeal or oropharyngeal swab datum
OBI:0003277 virus in nasopharyngeal or oropharyngeal swab datum
OBI:0003278 bacteria in pleural fluid datum
OBI:0003279 eukaryota in pleural fluid datum
OBI:0003280 virus in pleural fluid datum
OBI:0003281 eukaryota in umbilical cord blood datum
OBI:0003282 lung microbiology assay
OBI:0003283 pleural fluid microbiology assay
OBI:0003284 umbilical cord blood microbiology assay
OBI:0003285 nasopharyngeal or oropharyngeal swab microbiology assay
OBI:0003286 urine microbiology assay
OBI:0003287 multiplex real time polymerase chain reaction assay
OBI:0003288 multiplex real time reverse-transcription polymerase chain reaction assay
OBI:0003289 mosquito membrane feeding device
OBI:0003290 mosquito membrane feeding assay
OBI:0003291 in silico design
OBI:0003292 cytometric bead array assay measuring epitope specific granulysin release by T cells
OBI:0003293 cytometric bead array assay measuring epitope specific perforin release by T cells
OBI:0003294 modified acid-fast stain microscopy assay
OBI:0003295 positive binding datum
OBI:0003296 antibodies from lymphocyte secretions assay