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NTR: bronchoalveolar lavage fluid #2995

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paulacalipho opened this issue Jul 27, 2023 · 3 comments
Closed

NTR: bronchoalveolar lavage fluid #2995

paulacalipho opened this issue Jul 27, 2023 · 3 comments
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@paulacalipho
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Preferred term label: bronchoalveolar lavage fluid

Definition (free text, please give PubMed ID) Cells and fluid from bronchioles and lung alveoli obtained after washing out of the lungs with saline or mucolytic agents.
BTO_0000155, MESH/D018893, NCI Thesaurus/ C51913

Parent term (use https://www.ebi.ac.uk/ols/ontologies/uberon)
respiratory system fluid/secretion, UBERON_0006538

Your nano-attribution (ORCID)
https://orcid.org/0000-0002-0819-0473

@ghost
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ghost commented Jul 28, 2023

@paulacalipho, this term may be outside the scope of Uberon as it is "obtained after washing out of the lungs". Could you use BTO:0000155 for your purposes? If not, are you able to use EFO terms, as it may be more suitable to add the term there?

FYI @zoependlington

@paulacalipho
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@bvarner-ebi Thanks for the feedback, I understand. We only use UBERON or CL to describe the origin of the cell lines. A solution would be to map to the general term respiratory system fluid/secretion, UBERON_0006538. You can close/remove this NTR if you wish.

@cmungall
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I suggest coordinating with the OBI group

@anitacaron anitacaron closed this as not planned Won't fix, can't repro, duplicate, stale Aug 26, 2023
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