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to discuss: get rid of pybids dependency #69

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lzehl opened this issue Jul 5, 2024 · 1 comment

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lzehl commented Jul 5, 2024

reasons:

pybids comes with a lot of additional dependencies we don't need
pybids does not extract all the things we need anyway

suggestion:

have a look at the bybids code and see if we can extract the parts we need directly here
maybe have a look if we can make use of the yaml that define the bids specs

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lzehl commented Aug 26, 2024

alternative packages we could have a look at instead of pybids:
ancpBIDS
Docu: https://ancpbids.readthedocs.io/en/latest/
Github: https://github.com/ANCPLabOldenburg/ancp-bids
MRdataset
Docu: https://open-minds-lab.github.io/MRdataset/
GitHub: https://github.com/Open-Minds-Lab/MRdataset

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