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v1: MINDS
Lyuba Zehl edited this page Jun 9, 2020
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- @type [required; expects: "https://schema.hbp/minds/Activity"]
- @id [required; expects: "minds/core/activity/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- methods [required; expects: minds/experiment/method/v1.0.0]
- approval [expects: minds/ethics/approval/v1.0.0]
- authority [expects: minds/ethics/authority/v1.0.0]
- description [expects: free text]
- preparation [expects: minds/core/preparation/v1.0.0]
- protocol [expects: minds/experiment/protocol/v1.0.0]
For more details have a look at the raw activity.schema.json.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Agecategory"]
- @id [required; expects: "minds/core/agecategory/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
For more details have a look at the raw agecategory.schema.json.
Check out the already registered JSON LDs for https://schema.hbp/minds/Agecategory.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Dataset"]
- @id [required; expects: "minds/core/dataset/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- activities [required; expects: minds/core/activity/v1.0.0]
- contributors [required; expects: minds/core/person/v1.0.0]
- description [required; expects: free text]
- embargoStatus [required; expects: minds/core/embargostatus/v1.0.0]
- license [required; expects: licenses/core/information/v1.0.0]
- owners [required; expects: minds/core/person/v1.0.0]
- containerURL [expects: free text (URL to data on EBRAINS storage)]
- dataLink [expects: free text (URL to data on storage outside of EBRAINS]
- DOI [expects: datacite/core/doi/v1.0.0]
- file [expects: cscs/core/file/v1.0.0]
- formats [expects: minds/core/format/v1.0.0]
- modality [expects: minds/core/modality/v1.0.0]
- parcellationAtlas [expects: minds/core/parcellationatlas/v1.0.0]
- parcellationRegion [expects: minds/core/parcellationregion/v1.0.0]
- publications [expects: minds/core/publication/v1.0.0]
- referenceSpace [expects: minds/core/referencespace/v1.0.0]
- specimenGroups [expects: minds/core/specimengroup/v1.0.0]
- versionOf [expects: minds/core/dataset/v1.0.0]
For more details have a look at the raw dataset.schema.json.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Embargostatus"]
- @id [required; expects: "minds/core/embargostatus/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
For more details have a look at the raw embargostatus.schema.json.
Check out the already registered JSON LDs for https://schema.hbp/minds/Embargostatus.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Format"]
- @id [required; expects: "minds/core/format/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
For more details have a look at the raw format.schema.json.
Check out the already registered JSON LDs for https://schema.hbp/minds/Format.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Licensetype"]
- @id [required; expects: "minds/core/licensetype/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
This schema is DEPRECATED. Please use instead licenses/core/information.schema.json.
For more details have a look at the raw licensetype.schema.json.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Method"]
- @id [required; expects: "minds/core/method/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
This schema is DEPRECATED. Please use instead experiment/method.schema.json.
For more details have a look at the raw method.schema.json.
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Modality"]
- @id [required; expects: "minds/core/modality/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name[required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Person"]
- @id [required; expects: "minds/core/person/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- shortName [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Placomponent"]
- @id [required; expects: "minds/core/placomponent/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- description [expects: free text]
- file [expects: ???]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Preparation"]
- @id [required; expects: "minds/core/preparation/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Publication"]
- @id [required; expects: "minds/core/publication/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- authors [expects: minds/core/person/v1.0.0]
- cite [expects: free text]
- DOI [expects: free text (doi)]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Referencespace"]
- @id [required; expects: "minds/core/referencespace/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Sex"]
- @id [required; expects: "minds/core/sex/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Softwareagent"]
- @id [required; expects: "minds/core/softwareagent/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- description [expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Species"]
- @id [required; expects: "minds/core/species/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- ontologicalTerm [expects: ontologies/core/organism/v1.0.0]
Back to OVERVIEW OF SCHEMAS. :
- @type [required; expects: "https://schema.hbp/minds/Specimengroup"]
- @id [required; expects: "minds/core/specimengroup/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- subjects [expects: minds/experiment/subject/v1.0.0]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Method"]
- @id [required; expects: "minds/experiment/method/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Protocol"]
- @id [required; expects: "minds/experiment/protocol/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Sample"]
- @id [required; expects: "minds/experiment/sample/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- file [expects: cscs/core/file/v1.0.0]
- methods [expects: minds/experiment/method/v1.0.0]
- parcellationAtlas [expects: minds/core/parcellationatlas/v1.0.0]
- parcellationRegion [expects: minds/core/parcellationregion/v1.0.0]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Subject"]
- @id [required; expects: "minds/experiment/subject/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- ageCategory [required; expects: minds/core/agecategory/v1.0.0]
- species [required; expects: minds/core/species/v1.0.0]
- age [expects: free text (number unit)]
- genotype [expects: free text]
- samples [expects: minds/experiment/sample/v1.0.0]
- sex [expects: minds/core/sex/v1.0.0]
- strain [expects: free text]
- weight [expects: free text (number unit)]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Approval"]
- @id [required; expects: "minds/ethics/approval/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
- generatedBy [required; expects: minds/ethics/authority/v1.0.0]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Authority"]
- @id [required; expects: "minds/ethics/authority/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: text entry]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp/minds/Role"]
- @id [required; expects: "minds/prov/role/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [required; expects: free text]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp.eu/brainviewer/Link"]
- @id [required; expects: "brainviewer/viewer/link/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- alias [expects: free text]
- link [expects: free text (URL)]
- referenceToDataset [expects: minds/core/dataset/v1.0.0]
- referenceToSample [expects: minds/experiment/sample/v1.0.0]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp.eu/hbppreview/Filepreview"]
- @id [required; expects: "hbppreview/core/filepreview/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- file [expects: cscs/core/file/v1.0.0]
- isPreviewAnimated [expects: boolean]
- previewURL [expects: free text (URL)]
- staticImageUrl [expects: free text (URL)]
- thumbnailImageUrl [expects: free text (URL)]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp.eu/neuroglancer/Coordinate"]
- @id [required; expects: "neuroglancer/seeg/coordinate/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- name [expects: free text]
- dataset [expects: minds/core/dataset/v1.0.0]
- referenceSpace [expects: free text ???]
Back to OVERVIEW OF SCHEMAS.
- @type [required; expects: "https://schema.hbp.eu/neuroglancer/Neuroglancer"]
- @id [required; expects: "neuroglancer/viewer/neuroglancer/v1.0.0/([A-Za-z0-9_-]+).json" (regex pattern)]
- alias [expects: free text]
- dataset [expects: minds/core/dataset/v1.0.0]
- postfix [expects: free text ???]
Back to OVERVIEW OF SCHEMAS.