Merge pull request #406 from openforcefield/aniline-hessian-update-clean #3289
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--- | |
# lifecycle processing for all datasets currently being tracked - submission | |
name: Dataset Lifecycle - Submission | |
on: | |
# run when there is a push that includes something in ./submissions | |
# e.g. occurs when we merge a submission PR into master | |
push: | |
branches: | |
- master | |
paths: | |
- 'submissions/**' | |
# run three times a day, offset from other workflows | |
schedule: | |
- cron: "0 02,10,18 * * *" | |
workflow_dispatch: | |
defaults: | |
run: | |
shell: bash -l {0} | |
jobs: | |
exec-lifecycle: | |
runs-on: ubuntu-latest | |
env: | |
OE_LICENSE: ${{ github.workspace }}/oe_license.txt | |
steps: | |
- name: Checkout code | |
uses: nschloe/action-cached-lfs-checkout@v1 | |
- name: ensure we only have one instance running | |
uses: softprops/turnstyle@master | |
env: | |
GITHUB_TOKEN: ${{ secrets.GH_DANGERBOT_TOKEN_LIMITED }} | |
with: | |
abort-after-seconds: 60 | |
- name: Additional info about the build | |
run: | | |
uname -a | |
df -h | |
ulimit -a | |
- name: Install environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: devtools/conda-envs/queued-submit.yaml | |
create-args: >- | |
python=3.11 | |
cache-environment: true | |
- name: Environment Information | |
run: | | |
conda info | |
conda list | |
- name: Make oe_license.txt file from GH org secret "OE_LICENSE" | |
env: | |
OE_LICENSE_TEXT: ${{ secrets.OE_LICENSE }} | |
run: | | |
echo "${OE_LICENSE_TEXT}" > ${OE_LICENSE} | |
- name: Run lifecycle processing script | |
env: | |
GH_TOKEN: ${{ secrets.QCA_DATASET_SUBMISSION_PAT }} | |
QCA_USER: ${{ secrets.QCA_USER }} | |
QCA_KEY: ${{ secrets.QCA_KEY }} | |
run: | | |
python ./management/lifecycle.py --states "Queued for Submission" |