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    • Jupyter Notebook
      0200Updated Sep 19, 2024Sep 19, 2024
    • Notes and script for the Linux analysis machines
      0000Updated May 31, 2024May 31, 2024
    • MATLAB tools for running imaging experiments with ScanImage
      MATLAB
      GNU General Public License v3.0
      3420Updated May 24, 2024May 24, 2024
    • Affine registration of 3D image stacks
      MATLAB
      GNU General Public License v3.0
      1300Updated Mar 9, 2023Mar 9, 2023
    • Mirror of the brainglobe GitBook page
      4000Updated Jan 6, 2023Jan 6, 2023
    • Basic bench optics exercises
      TeX
      3190Updated Oct 4, 2022Oct 4, 2022
    • neuroconv

      Public
      Extract metadata from Bonsai outputs
      Python
      Other
      3000Updated Jan 11, 2022Jan 11, 2022
    • Python
      MIT License
      2400Updated Dec 17, 2020Dec 17, 2020
    • MATLAB control classes for lasers
      MATLAB
      GNU General Public License v3.0
      1450Updated Sep 2, 2020Sep 2, 2020
    • ast_model

      Public
      Asymmetric Student-t model for neuropil decontamination
      MATLAB
      MIT License
      2100Updated Jul 5, 2019Jul 5, 2019
    • Analysis code specific to Han et al.
      MATLAB
      1100Updated Feb 15, 2019Feb 15, 2019
    • Open Ephys GUI with plugin architecture
      C++
      683000Updated Apr 3, 2018Apr 3, 2018
    • MATLAB tool for aligning mesoscope beam.
      MATLAB
      1000Updated Nov 3, 2017Nov 3, 2017
    • Basic tools to load mesoscope stacks in Matlab
      MATLAB
      0000Updated Sep 25, 2017Sep 25, 2017
    • Classes to control lab actuators and other similar devices using MATLAB
      MATLAB
      GNU General Public License v3.0
      0200Updated Jun 13, 2017Jun 13, 2017
    • Basic introduction to Ca++ imaging analysis in MATLAB for complete beginners
      MATLAB
      0330Updated May 19, 2017May 19, 2017
    • Basic MATLAB introduction for complete beginners
      TeX
      0030Updated May 17, 2017May 17, 2017
    • GIT introductory presentation using the GIT parable
      TeX
      0000Updated May 13, 2016May 13, 2016