Repositories list

• pysam_containers

  Public
  Pysam module (python2.7) singularity container

  singularitypython2singularity-hub+ 1pysam

  Shell

  •0•0•0•0•Updated Nov 21, 2018Nov 21, 2018

• bcl2fastq2_containers

  Public
  bcl2fastq2 containerized in singularity

  Shell

  •0•0•0•0•Updated Nov 20, 2018Nov 20, 2018

• bcftools_containers

  Public
  bcftools singularity container

  ngsnext-generation-sequencingsingularity+ 6vcfhtslibsingularity-containersvcftoolsbcftoolssingularity-hub

  Shell

  •0•0•0•0•Updated Nov 8, 2018Nov 8, 2018

• vep_containers

  Public
  VEP environments containerized for singularity

  recipessingularitysingularity-containers+ 2singularity-hubensembl-vep

  Shell

  •0•1•0•0•Updated Aug 23, 2018Aug 23, 2018

• nextflowgularity

  Public
  Nextflow + Singularity environments containerized

  recipessingularity-containerssingularity-hub+ 2nextflowsingularity

  Dockerfile

  •0•0•0•0•Updated Aug 2, 2018Aug 2, 2018

• bedtools

  Public
  bedtools environment containerized for singularity

  recipessingularitysingularity-containers+ 2bedtoolssingularity-hub

  Shell

  •0•0•0•0•Updated May 22, 2018May 22, 2018

• scout

  Public
  VCF visualization interface

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •46•0•0•0•Updated Apr 24, 2018Apr 24, 2018