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    17 repositories

    • AMEGA-benchmark

      Public
      AMEGA-LLM: Autonomous Medical Evaluation for Guideline Adherence of Large Language Models
      Python
      •
      Apache License 2.0
      •1•4•0•0•Updated Oct 24, 2024Oct 24, 2024

    • sproto

      Public
      Python
      •0•0•0•0•Updated Jun 12, 2024Jun 12, 2024

    • ClinicalOutcomePrediction-IV

      Public
      Python
      •0•3•0•0•Updated Apr 24, 2024Apr 24, 2024

    • medBERT.de

      Public
      Python
      •
      MIT License
      •0•3•0•0•Updated Oct 17, 2023Oct 17, 2023

    • UMLSParser

      Public
      Python module to parse UMLS source files
      Python
      •
      Apache License 2.0
      •1•19•4•0•Updated Feb 27, 2023Feb 27, 2023

    • Beir-Evaluation

      Public
      Python
      •0•0•0•0•Updated Jan 13, 2023Jan 13, 2023

    • ClinicalSupportSetAugmentation

      Public
      Using support sets to augment clinical texts to predict a patients outcome. Paper published at COLING 2022
      Python
      •0•1•0•0•Updated Oct 31, 2022Oct 31, 2022

    • ConformalProtoPatient_tmp

      Public
      Code for ProtoPatient model and experiments described in 'This Patient Looks Like That Patient'.
      Python
      •1•0•0•0•Updated Oct 21, 2022Oct 21, 2022

    • TrainX

      Public
      Python
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated May 23, 2022May 23, 2022

    • TeXooPy

      Public
      Python module to parse TeXoo JSON
      Python
      •
      Apache License 2.0
      •0•0•12•1•Updated Dec 13, 2021Dec 13, 2021

    • EntEvalDockerized

      Public
      A dockerized implementation of the EntEval Benchmark. Link to paper: "https://arxiv.org/abs/1909.00137"
      Python
      •0•0•0•0•Updated Sep 5, 2021Sep 5, 2021

    • SentEval-k8s

      Public
      Python
      •
      Other
      •0•1•0•0•Updated Jul 27, 2021Jul 27, 2021

    • adapter-transformers

      Public
      Huggingface Transformers + Adapters = ❤️
      Python
      •
      Apache License 2.0
      •346•0•0•0•Updated Feb 17, 2021Feb 17, 2021

    • MedMentionsReader

      Public
      Python
      •
      Apache License 2.0
      •0•2•1•0•Updated Jun 2, 2020Jun 2, 2020

    • pubmedsection

      Public
      Generate the PubMedSection-Dataset
      PLSQL
      •
      Apache License 2.0
      •0•0•0•0•Updated May 18, 2020May 18, 2020

    • EntEval-1

      Public
      Entity Evaluation code
      Python
      •
      Other
      •3•0•0•0•Updated May 14, 2020May 14, 2020

    • TeXoo

      Public
      TeXoo – A Zoo of Text Extractors
      Java
      •
      Apache License 2.0
      •3•0•0•0•Updated May 20, 2019May 20, 2019